Malaciobacter pacificus: APAC_1100
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Entry
APAC_1100 CDS
T06712
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
apai
Malaciobacter pacificus
Pathway
apai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APAC_1100 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apai03021
]
APAC_1100 (rpoA)
03400 DNA repair and recombination proteins [BR:
apai03400
]
APAC_1100 (rpoA)
Enzymes [BR:
apai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APAC_1100 (rpoA)
Transcription machinery [BR:
apai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APAC_1100 (rpoA)
DNA repair and recombination proteins [BR:
apai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APAC_1100 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QEP34226
UniProt:
A0A5C2HAL9
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All DBs
Position
1077121..1078119
Genome browser
AA seq
332 aa
AA seq
DB search
MKKFADTPFLPTEVEIEAISENEAKISAYPFESGFAITLAHPLRRLLLSSSIGYAPIAVK
IEGASHEFDSLRGMLEDIAIFIINLKNIRFKINGDKDQVVVEYSFNGPKEIKGEDLINSD
VEIVSPDVHLATINSDCNLTFSVIIQKGIGYMPSEDIRDIVGPDYIPIDAFFTPVKKVVY
DIEKMLVEDNPNFEKAVFTVQTNGQISPVTAFKEAVSVMYSQMSVFNKVFDLSEVTVSET
GEEPVELKDLIIKIDDLNLSARSFNSLDRAGLKFLGELVLMSEVEVKNIKNLGKKSYDEI
AEKLESLGYPVENTLPENVASALRRKLEQLKA
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttgcagacacaccgtttttaccaactgaagttgagatcgaagctatcagc
gaaaatgaagctaaaatatcagcatatccatttgaaagtggttttgcaattactttagcg
caccctttaagaagacttttattaagctcttcaattggttacgcaccaattgctgtaaaa
attgaaggtgcttctcatgagtttgactctttaagaggtatgctagaagatatagctatt
tttattattaatctaaaaaacattagatttaaaattaacggcgataaagatcaagtagta
gtagagtactcatttaatgggccaaaagaaattaaaggtgaagatttaatcaactctgat
gttgaaattgtttctccagacgttcacttagctactatcaacagtgactgtaacttaact
ttctctgtaattattcaaaaaggtattggatatatgccttctgaagatattagagatatt
gttgggccagattacattcctattgatgcattctttactccagttaaaaaagtagtatat
gatattgaaaaaatgttagttgaagataaccctaactttgaaaaagctgtatttactgta
caaacaaatggacaaatttctccagttactgcatttaaagaagcagtatcagttatgtac
tctcaaatgtcagtatttaacaaagtatttgatttatctgaagtaacagtaagtgaaact
ggagaagagccagtagaactaaaagatttaatcattaaaattgatgatttaaatttaagt
gctagaagtttcaactctttagatagagctggattaaaattcttaggtgaactagtactt
atgagtgaagttgaagtaaaaaatattaagaacttaggtaaaaaatcttatgacgaaatt
gctgaaaaattagagtcattaggatacccagttgaaaatacacttccagaaaatgttgct
tctgcattaagaagaaaattagagcaactaaaagcataa
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