Malaciobacter pacificus: APAC_1306
Help
Entry
APAC_1306 CDS
T06712
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
apai
Malaciobacter pacificus
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apai03400
]
APAC_1306 (phrB)
Enzymes [BR:
apai01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
APAC_1306 (phrB)
DNA repair and recombination proteins [BR:
apai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
APAC_1306 (phrB)
Prokaryotic type
APAC_1306 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QEP34423
UniProt:
A0A5C2H6I2
LinkDB
All DBs
Position
1308803..1310152
Genome browser
AA seq
449 aa
AA seq
DB search
MKQILWFRRDLRVNDSEILANAKDEVLPIFIFDKDILEKLSKDDKRVTFIYQSVLKLKKE
LKDIGLDLAIFYSTPVEVFKSLQKDGFDEVLASIDYEQYSIRRDNQIEQIVSMRRFLDSF
ILKPHTHTKKDKTPYKVFTPFYKSLNYIWESEALQEFETPKNLKKIEFDYETIPTLEEMG
FEKQGLPEFLNKSADELIFDFSQKISDYQEARDVFYKDGTSNLAVHLRFGLISPRQVFNK
IKKLRAPQGQKDFYIRELFWREFYNYILFHFPKSETQNFNGIKINWRNDENEFKAWCEGN
TGVPIIDASMRYFNQTGTMHNRLRMIVSSYLTKNLLIDWKWGERYFASKLLDYEASSNIG
SWQWAASTGADSVPYFRIFNPYLQSAKFDKEAIFIKKVIPQLKDIENKLIHTEGGVQSNL
FVDYPLSIVSISYSRDRAIKEFKRANSKE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagatactttggtttagaagagacttaagagttaatgatagtgaaatattggca
aatgccaaagatgaggtattgcctatatttatttttgataaggatatcttagaaaaacta
tcaaaagatgataaaagagtaacttttatttatcaaagtgttttaaaactaaaaaaagaa
ttaaaagatattggtcttgatttagcgattttttattcaactccagttgaagtatttaaa
agtttgcaaaaagatggatttgatgaggtattagcaagtattgattatgagcaatatagt
attagaagagataatcaaatagaacaaattgtatctatgagaagatttttagattcgttt
attttaaagcctcatactcatacaaaaaaagataaaacaccatataaggtttttactcca
ttttacaaatcacttaattatatttgggaaagtgaagccttgcaagagtttgaaactcca
aagaatttaaagaagatagagtttgattatgaaactattcctactttagaagagatggga
tttgaaaaacagggattacctgagtttttaaacaaaagtgctgatgagcttatttttgat
ttttcacaaaaaattagtgattatcaagaagcaagagatgttttttataaagatggaaca
tcaaatttagcagtgcacttaagatttggacttattagtccaagacaagtttttaataaa
ataaaaaaattaagagcacctcaaggtcaaaaagatttctacattagagagttattttgg
agagaattttataactatattttatttcatttcccaaaaagtgaaactcaaaatttcaat
ggtataaaaataaattggcgaaatgatgagaatgaatttaaagcttggtgtgaaggaaat
acgggtgttcctataattgatgcttctatgagatactttaatcaaacaggaactatgcat
aatagattaagaatgattgtatcttcatatctaacgaaaaacttacttatagattggaaa
tggggtgagaggtattttgcttctaaattacttgattatgaagcaagttcaaatataggt
tcttggcagtgggcagctagtactggtgcagatagtgtgccttattttaggatttttaat
ccatatttacaatcagcaaaatttgataaagaagcaatatttatcaaaaaagttatacca
cagttaaaagatattgaaaataaacttattcatactgaaggaggagttcaatctaactta
tttgtagattaccctttaagtatagtttctatttcctactcaagagatagagcaataaaa
gagtttaaaagagcaaattcaaaagagtag
DBGET
integrated database retrieval system
