Malaciobacter pacificus: APAC_1772
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Entry
APAC_1772 CDS
T06712
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease SbcCD, nuclease subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
apai
Malaciobacter pacificus
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apai03400
]
APAC_1772 (sbcD)
DNA repair and recombination proteins [BR:
apai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APAC_1772 (sbcD)
Archaeal homologous recombinant proteins
APAC_1772 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QEP34859
UniProt:
A0A5C2H956
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Position
complement(1782389..1783582)
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AA seq
397 aa
AA seq
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MRILHTSDWHLGQNFMGKSRVEEHSTFLNWLLEIIKEQNIEVLLVSGDIFDTGTPPNYAL
ELYYNFLKELANIKTLKNTIITAGNHDSISTLKAPKQLLEVLNVNVITTGDEDENIIIPI
KQDESVKAIVCAVPFLRDSVIRQANSGQTISEKEKVANSGIKAYYESAYKRAKELNQNIP
IVAMGHLTTVGSRTSESERDIYIGGTLDIGGDYLGGLFDYVALGHLHINQTVSSNHVRYS
GSPIPLSFSESKNTQKVNIVDINDSVEVQELEVPQMRKLIVIKGDSKTVQNELKNIEDKT
SWIEVHLKDDNPMFANTEIRELATKLELTILAIKIEKSEKQIRAKELKAISLDELSVNDV
FAKRVELEKIEDKEFESELIKNFKDVASKVSLNGSAT
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcttacacacctcagattggcacttaggacaaaattttatgggtaaaagtaga
gttgaagaacactctacttttctaaactggcttttagaaataatcaaagaacaaaacatc
gaagtacttttagtatcaggggatatttttgatacgggaactcctccaaactatgcacta
gagctttactataactttctaaaagagttagcaaatataaagactttaaaaaacactatc
ataacagctggaaatcacgatagtatctcaacactaaaagcaccaaaacaactacttgaa
gtacttaatgtaaatgtaatcacaactggtgatgaagatgaaaatatcataataccaata
aaacaagatgaaagtgtaaaagccatagtatgtgcagtaccatttttaagagatagtgtt
atacgacaagcaaactctggtcaaacgataagcgaaaaagagaaagtagcaaatagtggt
ataaaagcatactatgaaagtgcatataaaagagcaaaagagttaaatcaaaatattcct
atagttgctatgggacatcttacaacagtaggaagtagaacaagtgagagtgaaagggat
atctatataggtggaacacttgatattggtggggattatttaggaggtctttttgactat
gtggcattagggcatcttcatatcaatcaaacagtttcatcaaatcatgtgaggtattct
ggaagtccaatacctctaagtttttctgagtctaaaaatactcaaaaggtaaatatagta
gatattaatgatagtgtagaagttcaagaactagaagtaccacaaatgcgaaagctaata
gttatcaaaggtgatagtaaaactgtacaaaatgaacttaaaaatatagaagataaaacc
tcatggatagaagttcatctaaaagatgataatcctatgtttgcaaatacagaaataaga
gaactagccacaaaattagaacttaccatcttagctataaaaatagaaaaaagtgaaaag
caaataagagcaaaagagttaaaagctataagcttagatgaacttagtgtcaatgatgta
tttgcaaaaagagttgagcttgaaaaaatagaagacaaagagtttgaaagtgaactaatc
aagaacttcaaagatgtagcttcgaaagtgtctcttaatggaagtgctacatga
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