Malaciobacter pacificus: APAC_2280
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Entry
APAC_2280 CDS
T06712
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
apai
Malaciobacter pacificus
Pathway
apai03030
DNA replication
apai03430
Mismatch repair
apai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APAC_2280 (holA)
03430 Mismatch repair
APAC_2280 (holA)
03440 Homologous recombination
APAC_2280 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apai03032
]
APAC_2280 (holA)
03400 DNA repair and recombination proteins [BR:
apai03400
]
APAC_2280 (holA)
Enzymes [BR:
apai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APAC_2280 (holA)
DNA replication proteins [BR:
apai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APAC_2280 (holA)
DNA repair and recombination proteins [BR:
apai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APAC_2280 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ExbD
Motif
Other DBs
NCBI-ProteinID:
QEP35341
UniProt:
A0A5C2H8Q0
LinkDB
All DBs
Position
complement(2278133..2279113)
Genome browser
AA seq
326 aa
AA seq
DB search
MYKNEFDNHFKNNKKYSAYMFYGQSNYLIEHYSLMVAKSHGSIDECEKLYFDDYNFKYAK
DKLLQSSLFSSNNILVIKCDKKIPKKEVDELIQACNTNSDSTVIFSCMGDSDFKAMEKSF
SDKTNSVCVRFFKPFDTEAVRLLENEAKSLNINYELSALNHLYFMHKNDLSLCVNDLNKL
AIFDEKITSNIINTHCFGIGAVNFEDFLHDLIAGKDISNDLASLLEEGMNEIFLLNQITS
FVQQLFMISAYARAIGQPNPKEILGFIPPKNIWEKKSKLAINIKPEVFQEIFNYLLQIEL
DFKTSKIDKQSLYLQASLRKFTVLFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaacgaatttgataatcattttaaaaataataaaaaatatagtgcatatatg
ttttacggacaatctaattatttaatagaacactattcattaatggtggctaagagtcat
ggtagtattgatgagtgtgagaaactctattttgatgattataattttaaatacgcaaaa
gataaacttcttcaatcatcacttttttcatcaaacaatattttagtaattaaatgtgat
aaaaaaatacctaaaaaagaggtagatgaactaattcaagcttgtaatacaaacagtgat
agtacagttattttttcatgtatgggagatagtgattttaaagctatggagaaaagtttt
tctgataaaacaaactctgtttgtgttagattttttaaaccttttgatactgaagcagta
agattacttgaaaatgaagctaaaagtttaaatataaattatgaattgtctgctttaaat
catctatattttatgcataaaaatgatttatcattatgtgttaacgatctaaataaactt
gcgatatttgatgaaaaaatcacttcaaatataatcaatactcattgctttgggataggt
gctgttaattttgaagattttttacatgatttaattgctggaaaagatattagtaatgat
ttagcctcattattagaagagggaatgaatgagatttttttattaaatcaaattacatct
tttgttcaacagctttttatgattagtgcatatgcaagagctataggacaaccaaaccct
aaagaaatattaggctttattcctcctaaaaatatttgggaaaagaaatcaaagttggct
ataaatatcaaacctgaagtttttcaagagatttttaactatttattgcagattgagtta
gattttaaaacttcaaaaatcgataagcaaagtttataccttcaagcaagtctaagaaaa
ttcacagttttatttagataa
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