Aeribacillus pallidus: AP3564_04390
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Entry
AP3564_04390 CDS
T04993
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
apak
Aeribacillus pallidus
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apak03000
]
AP3564_04390
Transcription factors [BR:
apak03000
]
Prokaryotic type
Helix-turn-helix
Other families
AP3564_04390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
Mg_chelatase
AAA_2
MCM
PAS
HTH_23
PAS_9
AAA
HTH_50
Diacid_rec
HTH_30
HTH_29
AAA_3
PAS_8
PAS_7
HTH_7
HTH_1
HTH_17
HTH_28
IclR_C
AAA_7
AAA_22
Diguanyl_cycl_sensor
Xre-like-HTH
DUF815
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASS89596
UniProt:
A0A223E2Y4
LinkDB
All DBs
Position
complement(918340..920265)
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AA seq
641 aa
AA seq
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MKKREYVKQCWKRFIFENKLDEKLSPIVKDSWIRSKEMNVDPFQRYGQMKKIEIDHYKPL
IECSVPFMEGLYSIVKGSGFLVILCNEKGQLLKSIGDADTLKMAADIQFVEGADWSEQAM
GTNAIGTSIVINQPVQIYAEEHYSEICQAWTCSAAPIHDSKGRIIGVLNVSGPYEKVHPH
TLGMVVSAVKAIEYQLELIEKTEKNIMMQRFLEATTNNMKESILIFDTEGLIIKVNDQLK
KLLQLNHSCLEGKKISEVFSNKSIISNRPRHLQNHELHLKIKQSNKVFHVLVDKLPIYKD
SQWIGSMMIIKEIQKIRQFINHLSGNQAKITFSDMIGKHPQFLQKVNEAKLAAKTDSNVL
ILGESGTGKEMFAQAIHNESDRKHKPFIAINCGGIPRDLLGSELFGYADGAFTGAKKGGS
AGKFELADGGTLFLDEIGEMSLEMQVLLLRVIQEKEVVRIGGHKVLPVDVRIIAATNKNL
REEVEKGSFREDLFFRLNVMPITLPSLRERKEDIPLFVHHFIEKNCEKLNKPFPEIKPDF
FQALIHYHWPGNIRELQNIVERTLNKLTKPVLTIKDLPEEIIKTDSKPKSETVFIHRDEM
KKQSILQALRLYNGNITKAAQYLGISRSTFYRQMQRFQIPY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagagagtatgtcaaacaatgttggaagcgctttatttttgaaaataagctt
gacgaaaaattatctcccattgtaaaggattcatggattcgttccaaagaaatgaatgtt
gatccttttcaacgatatggtcaaatgaaaaaaatcgaaatagaccattacaagccttta
attgaatgttcggttccgtttatggaaggattgtattcaatcgtaaagggctcaggtttt
ttagtgattctttgcaacgaaaagggacagttgttaaaatcaattggcgacgctgatacg
ttaaagatggcagctgatattcaatttgtggaaggtgctgattggagtgaacaagcaatg
ggaacgaatgcaatcggcacttcgattgtgatcaatcaacctgtacaaatatatgctgag
gagcattattcggaaatttgccaggcatggacatgctcggccgcgcccattcacgattca
aaaggaaggataatcggcgtattaaatgtttcaggcccatatgaaaaagtgcatccacat
actttaggaatggtagtgtcagcagtgaaagcgattgagtatcagctggagctgattgaa
aagacagaaaaaaacattatgatgcaaagatttcttgaagcgactaccaataatatgaaa
gagagcatcctcattttcgatacggaagggctcattattaaagtgaatgatcaattaaaa
aagctgcttcaattgaatcattcttgcctggaagggaaaaagatcagcgaagtttttagc
aacaaatcgattatttccaatcgccctcgacatcttcaaaatcatgaactgcacttaaaa
ataaaacagtcaaacaaagtttttcatgttctagttgataaactccccatttataaagac
agccaatggatcggttcaatgatgattataaaagagattcaaaagataagacaatttatt
aatcatttatcaggcaatcaggcgaaaatcactttttctgatatgatcgggaagcatccc
cagtttctccaaaaagtaaacgaagcgaagctagcagcaaaaacggactcaaatgtatta
attttaggagaaagcggtacgggaaaagaaatgtttgcacaagcgatccataatgaaagt
gacagaaagcataagccttttatagccatcaattgcggcggaattcctcgagatttatta
ggaagcgaactgtttggttatgcggacggtgcttttaccggagcgaaaaaagggggaagt
gcaggaaaatttgagcttgccgatggcggtacgctttttttagatgagattggagaaatg
tctttggaaatgcaagtattgcttttacgagtcatacaagaaaaggaagtggtgcgaatc
ggcgggcataaagttttgcctgttgatgttcgcatcatcgcagcgacgaacaaaaatctt
cgggaagaggtcgaaaaaggcagctttcgggaggatttgtttttccggcttaatgtcatg
ccgatcactttgccgtcattgcgagaaagaaaagaagacataccgctctttgttcatcat
tttattgaaaaaaattgtgaaaagttaaataagccttttcctgaaatcaaaccggatttt
tttcaagcgttaatacattatcattggccgggaaacattagagaattgcaaaatatagta
gaaagaactttaaacaaattgacgaagcctgttttaactattaaagatttgcctgaggaa
attataaaaacggactccaagccaaaatcggaaacggtgtttattcatcgagatgaaatg
aaaaagcagtcgatcttgcaagctttacgtctatataacggcaacatcacaaaagctgcg
caatatttagggatatcacgaagcactttttatcggcaaatgcaaagatttcaaatccct
tattaa
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