Aeribacillus pallidus: AP3564_04570
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Entry
AP3564_04570 CDS
T04993
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apak
Aeribacillus pallidus
Pathway
apak03420
Nucleotide excision repair
apak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AP3564_04570
03430 Mismatch repair
AP3564_04570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apak03400
]
AP3564_04570
Enzymes [BR:
apak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AP3564_04570
DNA repair and recombination proteins [BR:
apak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AP3564_04570
MMR (mismatch excision repair)
Other MMR factors
AP3564_04570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PhoH
AAA_22
SLFN-g3_helicase
DEAD
AAA_30
NACHT
AAA_11
AAA_16
Pox_A32
NPHP3_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASS89628
UniProt:
A0A223E2Z1
LinkDB
All DBs
Position
961068..963410
Genome browser
AA seq
780 aa
AA seq
DB search
MNTELRQEQERLDSIMAIIVEQIGMLENETSQRRKEVIDFRKHFWDDVKVNTDTFDDYLE
TIIALRQQAQNLSVSQSTHRQAFKRLSALRRMQEVPYFGRIDFIEEGSSAAERIYIGIST
LTDTSGENILIYDWRAPVSSVYYDYAPGPAEYTTPGGTVRGMLEKKWQYIIRGGVIKSMF
DTSLTIGDDILQQVLGRVTDKHMHNIVATIQREQNQIIRHDRGRLLIVQGPAGSGKTSAA
LQRIAYLLYKYRDKLRADQIILFSPNSMFNSYVSNVLPELGEENMQQVTFQEYLEYRLSK
EFQIEDPYEQLEYMLTEADDSLYRTRTASIRFKASTRFFETIKTYCKSLELSGMLFKDIL
FRGKPIITAKQITERFYSSDTSLRFHSRLEKLADWLNKQIDEAEKLERTKPWVQEEIELL
SNEDYHKAHTLLRKKRGFKAETLNNYENEIEALGQLIVRKKLKPLRKRIRTLRFIDMKGV
YKQLFADPTHVKQWMEGETPEEWEDICRLTVKTLDEGKLFYEDATPYLFLKELIQGFQTN
VSIKHVLVDEAQDYSPFQFEFLKRLFPSARMTVLGDFNQAIFAHASETVDFHTLTSLYGP
DKTDSITLTRSYRSTRQIIEFTRGLVPDGERITAFERDGDKPVLTRVSDQAELHRCIASK
VADLRKRGYNTIAIICKSAAESTAAYEALKRVEDIKLVKSGSTEYEQGVVVIPAYLAKGI
EFDAVIIYNASSHVYGVESLRRLFYTACTRAMHYLQLYSVGEPSPFLQNVVPGSFLQIPG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaacttcggcaggagcaagaacgattggacagcataatggcgatcattgtg
gagcaaatcggcatgctggaaaacgaaacctcccagcgtcgaaaagaagtgattgatttc
cgcaaacatttttgggatgacgtcaaggtgaatactgatacgttcgacgattatcttgag
acgatcatcgccttgagacaacaggcgcagaacctgtccgtgagccaaagcacccacaga
caagccttcaagaggttgtccgcgctgcgccgcatgcaggaggtgccttatttcggtcga
atcgatttcattgaggaagggtcttcagctgctgaacgaatctatatcggcatctccacg
ctcacggatacaagcggagagaacatcctgatctacgactggagggcgccggtctcgagt
gtctactacgattacgcgcccggtccggccgaatatactactcccggaggcacagtccgc
ggcatgctggagaaaaagtggcaatatatcatccgcggcggcgttatcaagtcgatgttc
gatacgagtctcaccattggagacgacattttacagcaggtgcttggcagagtgacagac
aaacatatgcacaatatcgtggccaccattcaacgggaacaaaaccagatcatccgtcat
gatcgcgggcggctgctcatcgtgcaaggacccgccggcagcggcaagacatcggctgcc
ctgcagcggatcgcttacttgctctacaagtatcgggataagctgagagccgatcaaatc
attttattttcacctaattcgatgtttaacagctacgtatccaatgtgctgcccgaacta
ggcgaagagaatatgcagcaggtcaccttccaggaatatttggaatatcggctgagcaaa
gaatttcaaatcgaggatccatacgagcaattggaatatatgttgactgaagcggatgac
tctttatacaggactagaactgcgagcatccgattcaaggcatcaacccgtttcttcgag
acgattaaaacatactgtaagtcgctggaattatccggcatgctattcaaagatattcta
tttagaggaaaaccgatcatcaccgccaaacaaatcacagaaaggttttatagcagcgac
acctcgctccgttttcacagcagacttgaaaagctggcagattggctaaacaagcaaatc
gatgaagcggagaagcttgaacggactaagccatgggtgcaggaagaaatcgagctgctt
agcaacgaggattatcataaagctcatactctcttacggaaaaaacgcggctttaaagca
gaaacgttgaacaactatgagaacgagatcgaagcgctgggccaattgatcgttcgcaag
aagttgaaaccgttgcgcaaacggatccgaacgcttcgtttcatcgacatgaagggagta
tacaagcagcttttcgccgatccaacgcatgtcaaacagtggatggaaggggaaacaccc
gaggagtgggaggatatttgccgattgactgtaaaaacgctagacgaaggcaaactgttt
tacgaagatgcaactccgtatttatttttgaaagagctgattcaaggctttcagacgaac
gtctcgatcaaacacgtgcttgtagacgaagcgcaagattattctccgtttcaattcgaa
tttttgaagcgtttgtttccttcggcgaggatgactgtgctcggcgactttaaccaagcg
atattcgctcatgccagtgaaacagtcgatttccacacgcttaccagcctatacggaccg
gataaaacggattcgatcaccttgacccgcagttacagatccacaagacagatcattgaa
tttacgcgcggactcgtacccgatggcgaacggatcactgcttttgaacgcgacggcgat
aagcctgtgttgacgagagtgtccgatcaagctgaactgcaccgctgtattgcttccaaa
gtcgcggacttgcggaaacggggatataatacgatcgcgattatatgtaaatctgctgcg
gaaagcaccgccgcatacgaagcactgaaaagagttgaagatataaaacttgtgaagagc
ggctctaccgaatatgaacaaggtgttgtcgttataccggcgtatttggcgaagggcatc
gaattcgacgccgtcatcatttataacgcttcatcgcacgtatacggcgttgagagcctg
cgcagattgttctacaccgcctgcacccgggctatgcattacttgcagctttacagtgta
ggcgaaccgagcccctttttacagaacgttgtgccgggtagtttccttcagatcccgggt
taa
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