Aeribacillus pallidus: AP3564_05865
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Entry
AP3564_05865 CDS
T04993
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
apak
Aeribacillus pallidus
Pathway
apak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AP3564_05865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apak03021
]
AP3564_05865
03400 DNA repair and recombination proteins [BR:
apak03400
]
AP3564_05865
Enzymes [BR:
apak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AP3564_05865
Transcription machinery [BR:
apak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AP3564_05865
DNA repair and recombination proteins [BR:
apak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AP3564_05865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
PASTA
Motif
Other DBs
NCBI-ProteinID:
ASS89839
UniProt:
A0A161ZUJ3
LinkDB
All DBs
Position
1206916..1207860
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIDGVVEDVTTIILNLKKLALKIYSEEEKTLEIDVQGEGPITAADITHDSDVEI
LNPDLHIATLAKDAHLRLRMTAKRGRGYSPAEENKREDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQVTDYDKLTIDVWTDGSIGPKEAIALGSKILMEHLNIFVSLTDEAQNVEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
QKLEDLGLSLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaaaccaaaaatcgaaacggttgaaatcagtgatgacgcgaaatat
gggaaattcgttgtcgagccacttgagcgtggatatggtacaactttgggtaactcctta
cgtcgtatcctattatcctcactccctggtgccgctgtaacatctgttcaaattgacggc
gtcctccatgaattttctacaattgatggtgtcgtcgaagatgttacaacgattatttta
aatttaaaaaagcttgctctgaaaatttattcagaagaagagaagacgctagaaattgac
gtacaaggtgaagggcccattacggcagcagatataactcacgatagcgatgttgaaata
ttaaatcctgatcttcatattgcaactcttgcgaaagatgctcatttgcggctgagaatg
acggcgaagcgcgggagaggatacagcccggctgaagaaaataaacgggaagatcaacca
ataggtgtcatcccaatcgattcgatttacacacccgtttctagagtttcttatcaagtg
gaaaatacacgggttggtcaagtgacagattatgataagctgacaattgatgtttggaca
gatggaagcatcggtccaaaggaagctatcgcacttggctctaaaattttgatggagcac
ttaaacattttcgttagcttaacagatgaagcgcaaaatgttgaaatcatggttgaaaaa
gaagaggaccaaaaagaaaaagtgcttgaaatgacgattgaggaacttgacctctctgtt
cgttcttataactgtttgaaacgtgcaggtattaacacagttcaagaacttgcgaacaaa
acagaagaggacatgatgaaagtgcgtaatttaggacgcaaatcgctagaagaagtaaaa
caaaaattagaagaccttggtttgagtttacgaaaagacgattaa
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