Aeribacillus pallidus: AP3564_06765
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Entry
AP3564_06765 CDS
T04993
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
apak
Aeribacillus pallidus
Pathway
apak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AP3564_06765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apak03019
]
AP3564_06765
03009 Ribosome biogenesis [BR:
apak03009
]
AP3564_06765
Enzymes [BR:
apak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AP3564_06765
Messenger RNA biogenesis [BR:
apak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AP3564_06765
Ribosome biogenesis [BR:
apak03009
]
Prokaryotic type
rRNA helicases
AP3564_06765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASS92291
UniProt:
A0A161ZSS1
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All DBs
Position
1391391..1392770
Genome browser
AA seq
459 aa
AA seq
DB search
MGFEEATPIQMQAIPLGLNNKDIIGQAQTGTGKTAAFGIPLVEKINVHDSAVQAIVIAPT
RELAIQVSEELYKIGYDKRTRVLPIYGGQDISRQIRALKKPPHIIVGTPGRLLDHIRRNT
LRLDSVHTVVLDEADEMLNMGFIDDIEHILSNIPRERQTLLFSATMPGPIKSIAERFMKN
PTHVRVKAKEVTVPNVQQYYLEVPEKQKFDVLTRLLDLQSPELAIVFGRTKRRVDELSEA
LNVRGYSAEGIHGDLSQAKRLSVLNKFKNGAIDVLVATDVAARGLDISGITHIYNFDVPQ
DPESYVHRIGRTGRAGKSGKAMTFITARERGILETIEHTTKRKMDRMRPPTLDEALVGKQ
KMTVEKICSVVETENLDQYKNFAAELLEKYDSVPLLAAAIKMLTKEPDTTPVKLTEEPPL
PMKKEKSRNKRKLDLKNKRVGRKRSFHSARSTKGSASPK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgaagaagcgactcccattcaaatgcaggcgatccctttaggcttgaacaat
aaagacatcattggacaagcgcaaacagggacaggaaaaacagcagcttttggcatccct
ttagtagaaaaaattaatgttcatgattcagctgttcaagcgattgtgatagccccaaca
cgggaacttgctatacaagtatcagaagagttatataaaatcggctatgataaacggaca
agagtattgccgatttacggaggccaggacatttccaggcagattcgggctttgaagaag
cctccccacatcattgttggaacacctggaaggttattggatcacatacggcgcaatacg
ctgcggcttgattctgtgcacactgtcgttttagatgaagcggatgaaatgctcaacatg
gggtttattgatgatattgagcacattctttcaaatattcctagggagcgtcaaaccctt
ctattttcggcaacaatgcctggtccaattaaatcaattgcagaacgctttatgaaaaat
ccgactcatgtccgtgttaaagcgaaagaagtaacggttccaaatgtgcagcaatattat
ttagaagtgcctgaaaaacaaaaatttgacgttttgacaagacttcttgatctgcaatca
ccggagcttgcgattgtgtttggcaggacaaagcgccgagtggacgaactttctgaagca
ttaaatgtccgcggctattcagcagaaggaattcatggcgatttaagccaagcgaaacgc
ttatctgttttgaacaaatttaaaaatggggccattgatgtacttgttgcaacagacgta
gcagccagagggcttgatatatctggtatcacccatatatataattttgatgtacctcaa
gaccctgaaagctatgtgcatagaattggaagaacaggacgggctggaaagtcaggaaaa
gcgatgacgtttataaccgcaagggaacgcggtattttggaaaccattgagcatacaaca
aaaagaaaaatggatcgaatgcgtcctcctactttagatgaagcactagtaggaaaacaa
aaaatgacggtcgaaaaaatttgctctgtagtggaaactgaaaatttagatcagtataaa
aattttgctgcggagctattggaaaaatatgattccgtcccattgcttgcagcagctatt
aaaatgttaacgaaggaaccggatacgacacctgtaaaattgacggaggaacctcctctc
cctatgaagaaagaaaaaagcagaaataaacgaaagcttgatttaaaaaacaaacgggtt
ggacggaaacgctcctttcattcagcaagatcgacaaaaggatcggctagcccaaaataa
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