Aeribacillus pallidus: AP3564_06845
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Entry
AP3564_06845 CDS
T04993
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
apak
Aeribacillus pallidus
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apak03021
]
AP3564_06845
Transcription machinery [BR:
apak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AP3564_06845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_10
GerE
HTH_Crp_2
HNF-1_N
DUF134
HTH_16
HTH_23
PhyR_sigma-like
KORA
HTH_3
Ins_allergen_rp
HTH_37
HTH_28
MarR_2
HTH_38
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
ASS90000
UniProt:
A0A223E471
LinkDB
All DBs
Position
1404448..1405233
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AA seq
261 aa
AA seq
DB search
MNKPHGQKRCNNEIHALIRQVQENKDEKAQEQIIELYQPIVVALAKKYSSSKMYQEDLVQ
VGMIGLLGAIDRFDPTVGKSFDAFVVPTIIGEIKRYLRDKTWSVHVPRRMKELGPKINAA
VEQLTSQLERSPKVKEIAEYLGAAEEEVLEAMEMVKNYHTLSVDHSIEAGPDGTAVTILD
LVGQKDEGLERILQKLTIENIMHVLTEREKEIILHSFYHNRSQKEIGEILGISQMHVSRL
LRQALKKLKKAVHDDPMEIGQ
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacctcatggtcaaaaacgatgcaataacgaaatccatgcactcattcgtcaa
gttcaggaaaataaagatgaaaaagcacaagaacaaattattgaactttatcagccaatt
gttgttgcactggcaaaaaagtactcaagttcgaaaatgtatcaggaggatttggtacag
gtcgggatgatcggtttattgggagcgattgatcgcttcgacccaacagttgggaaatca
tttgatgcgtttgttgttccaacgattattggagaaatcaaacgctatcttcgggataaa
acgtggagcgtccatgtgccccgcagaatgaaagaacttggaccaaaaataaatgcagcg
gtggagcagttgacgagtcagctggagcgctctccgaaggtcaaggaaatagcagaatat
ttaggagcagctgaggaagaagttttggaagctatggaaatggtcaaaaactatcatacg
ctttctgttgatcactcaatagaagctggaccggatggaaccgcggtcaccattttagat
cttgtcggacaaaaagacgagggcttggaacgcattcttcaaaaactgactattgaaaac
attatgcacgttttaactgagagagaaaaagaaattattctacattctttttatcataac
cgcagtcaaaaagaaataggtgaaattttaggcatctcccaaatgcatgtttccagacta
ttgcgccaagcattaaaaaaattaaaaaaagctgttcacgatgatccaatggagataggg
caatga
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