Aeribacillus pallidus: AP3564_09835
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Entry
AP3564_09835 CDS
T04993
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
apak
Aeribacillus pallidus
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apak03400
]
AP3564_09835
DNA repair and recombination proteins [BR:
apak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AP3564_09835
Archaeal homologous recombinant proteins
AP3564_09835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
GPS2_interact
PRK
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ASS90476
UniProt:
A0A223E5G9
LinkDB
All DBs
Position
2015093..2018500
Genome browser
AA seq
1135 aa
AA seq
DB search
MKPIKLSLAGLNSYRKMQTVDFETLCDGGVFGIFGPTGSGKSTILDAITLALYGKVERAA
NNTQGIMNHAEDQLYVSFTFELEDGRSKKRYTVERTFKRVDNVRINTRLCRLLEIGEETV
VLADKTNDVNDKIYELLGLTIEDFTRAVVLPQGKFAEFLSLKGSERRKMFERLFNLERFG
DQLNKKLKKRLLESRQQFAELSAEQAGLGDASKEAVLEAEKTFIRCDTVLKEREKQLDEA
AKEFERIQTIWNLQTEKTTYEKKRQELEQEKERFQEIEEKLKKAEQAEMLKPYAEAVLEH
LSEKDRFEKETEHWQQEEKKLASLYKEKKEAFEAIRAKKAVEEPELLTKRELLKQLISLD
AEIKEDEASFAKLKEDYEALKTRLHEKQHTEKKTSELLNRALEKQQALKQQAKEETVSRE
FREKIQKAYQQKLKIMQLMKDEYELKSKKQKKEDQLNEWREKADESARKKRELNERLAGK
FNQLQKVYDRLCSQMREHEFFKEKVKDDLQAAKSQLEEERTNQAAALISEQLTEGEPCPV
CGSTHHPAPNRHFSIERLKKLEETTQQLERIFKECDQTEQLYSSLKQKLQELSEDLQAEQ
SFLAGVKEIASANEEPIITMDDKPHDLLAYDKFKIEWKALNQDYLEIKDAIRKTIADIRE
VNHITAQIEPLLDAGEKDLSEIMLQLQNVIEQLEEEKRKWDLEFADLDMDQIEMYVKEIS
KKDSLVEQLHERIEKSVSFIQEKEQEIERLREEILNLSTQLAAKKGEMDRQAELIADKQK
RLTAQRAAKENLLTELKRIDLALEQLKRDEQAAYDIFQKTANEYQKAESQLHTAKQQLTS
CISKLEKAEKNWNDRKQQTPFANVHEVRNSVLQEEEKLAMQTSLDQYKKEMEHVASAIER
LEGKLGGAVLKQETWEETKKCLEEARKQVNEAMEQRGAAAKHLQLLKEKHERYVEIEKEK
EELQLLLNRLEKLQAVLKGNSFVEYMAEEQLQQISFDASQRLGELTRQRYAIEVDSEGGF
IMRDDANGGVKRPVSTLSGGETFLTSLALALSLSTQIQLRGKYPLQFFFLDEGFGTLDAE
LLDTVVSALEKLQSQNLSVGVISHVQELRERLPKRLIIEPAEPSGNGTTVRIETI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgataaaactttctttagctggactgaatagctatcgaaagatgcagacggtc
gattttgaaacactatgcgacggcggtgtcttcggaatatttggtccgactggcagcgga
aaatcaacgatattggatgccattacgttagcgctttatggaaaagtagagcgagcggcc
aataatacgcaagggataatgaaccatgcggaagatcaattatatgtcagttttacattt
gagcttgaagatggccgatcaaaaaaaagatacactgttgaacgaacatttaagcgggtg
gataatgtcaggatcaacacaaggctgtgccggcttctcgaaataggagaagaaacggtc
gttttggcagataaaacaaatgatgtaaatgacaagatttacgagcttttagggctgacg
atagaggattttacccgcgctgttgtccttccgcaagggaagtttgctgaatttctttct
ttaaaaggctcggaaagaaggaaaatgtttgaacgattgttcaatttggaacgattcggc
gaccaattaaataaaaagctgaaaaaacgtcttttggaatcaagacagcaattcgctgaa
ttgtcagcggaacaagcaggtcttggcgatgcctcgaaagaagccgttttagaggcagaa
aaaacgttcatacgctgtgatacagtgctgaaagaacgggaaaagcagctggatgaggca
gcaaaagaatttgagcggattcagacaatctggaatttgcagacggaaaaaacgacttat
gagaaaaaacgacaggagcttgagcaagaaaaggagcggtttcaagaaatcgaagaaaag
ctgaaaaaagcggagcaagcggagatgctgaaaccatatgcggaagcagtgctcgaacat
ttatcggaaaaggaccgttttgaaaaagaaacagagcattggcagcaggaagagaaaaag
ctagcaagcctttataaagaaaaaaaggaagcttttgaagcgattcgtgccaaaaaagct
gttgaagagccggagcttttaacaaaacgtgaactattgaaacagcttatctcattggat
gcagaaatcaaagaggatgaagcatcgtttgcaaagctgaaagaagactatgaagcattg
aaaacgaggctgcatgaaaaacagcatacagagaaaaagacgagcgaattattaaatagg
gcgttagagaagcagcaggctttaaaacagcaggcgaaagaagaaacagtttcaagagaa
ttccgggaaaaaatccaaaaagcatatcaacagaagctgaaaatcatgcagcttatgaaa
gacgaatatgaattaaaaagcaaaaagcaaaagaaagaagaccagcttaacgaatggcgg
gaaaaagcagacgagtccgcccgcaaaaaaagggaattaaacgaacgtctggcaggtaag
ttcaatcaattgcaaaaagtttatgatcgtttatgcagccaaatgcgggagcatgaattt
tttaaagaaaaagtaaaggatgatttgcaagcagcaaaaagtcagcttgaagaagaaaga
acaaatcaggcggcagctttgatttccgagcagttgacggagggagagccttgccctgtc
tgcggctccacacaccatccggccccgaacagacatttttcgattgaacgtttaaaaaaa
ttggaagaaacaacacagcagctagaacgaattttcaaagaatgtgatcaaaccgaacag
ctgtattcttcgctgaagcaaaagctgcaggagctgtctgaagatttacaagcggaacag
tcattccttgccggagtgaaagaaatagcgtcggctaacgaagagccgatcattacgatg
gacgataagcctcatgatcttttggcatatgacaaatttaaaatcgaatggaaagctttg
aaccaagattacttagaaataaaagacgcaataagaaaaacaatagcagacattcgtgaa
gtcaaccatattacagcacaaatagaaccgttgctggatgctggggaaaaagacttatcc
gaaatcatgctacaattgcaaaatgtaatagagcagctggaagaagaaaaaagaaagtgg
gatttagagtttgctgatctcgatatggatcaaatcgagatgtatgtaaaggaaattagt
aaaaaagactcgctcgttgaacagctgcacgaacgaattgaaaaaagcgtcagctttatt
caagaaaaagaacaggaaatcgagcggttaagggaagaaatactcaatctttccactcaa
ttagctgccaaaaaaggagaaatggacaggcaggcagaactgatagccgataaacagaaa
aggctcacagcgcaaagagctgcaaaggaaaaccttttaacagaacttaagaggatcgat
cttgcccttgaacagctaaaaagggatgaacaagcagcttatgatattttccaaaaaaca
gcaaatgaatatcaaaaagctgaaagtcagctccataccgccaaacagcaattgacaagc
tgtataagcaagcttgaaaaagcggaaaaaaattggaacgaccgaaaacagcagactcct
tttgcaaatgtgcatgaagtgagaaattccgttttgcaggaagaagaaaaactggctatg
caaacgagtctggatcaatataaaaaagaaatggagcatgtagcatctgcaattgaacgt
ctggaaggaaaattaggcggagctgttcttaagcaggaaacatgggaagaaacgaaaaaa
tgcttagaagaagctagaaagcaagtaaacgaagcaatggaacaaagaggcgcggcggca
aagcatttgcagctgttaaaggaaaaacatgaacgatatgtggaaatagaaaaagagaaa
gaagagttgcagcttcttcttaatcggttagaaaaacttcaagccgtcctgaaagggaat
agttttgtcgaatacatggctgaggaacagcttcaacaaataagctttgatgcttcacag
cggcttggggaattgacaagacaaagatatgcgattgaagtcgattcagaaggcggtttt
atcatgcgtgacgatgcaaatggcggagtaaaacgacctgtttcgacattatctggcgga
gaaacatttttaacttctttagccttagctttgtcgttgtccacccaaattcagcttcgc
ggaaaatatccgcttcagttttttttccttgatgaagggtttggaacgcttgatgcagag
cttctcgatacggttgtatcggctttggaaaaactgcaatcgcaaaatttatccgttggc
gtaatcagtcacgtgcaggagctaagggaacgattgcctaagcggctgatcattgagcca
gctgaaccttccggaaatggaacgaccgtgcgaatcgaaacgatttaa
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