Aeribacillus pallidus: AP3564_15395
Help
Entry
AP3564_15395 CDS
T04993
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apak
Aeribacillus pallidus
Pathway
apak03420
Nucleotide excision repair
apak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AP3564_15395
03430 Mismatch repair
AP3564_15395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apak03400
]
AP3564_15395
Enzymes [BR:
apak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AP3564_15395
DNA repair and recombination proteins [BR:
apak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AP3564_15395
MMR (mismatch excision repair)
Other MMR factors
AP3564_15395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
SLFN-g3_helicase
AAA_12
ResIII
Med30
Motif
Other DBs
NCBI-ProteinID:
ASS91415
UniProt:
A0A223E8H1
LinkDB
All DBs
Position
complement(3190295..3192703)
Genome browser
AA seq
802 aa
AA seq
DB search
MNKAKYSVLIFSPDIQQTTTDELYQYIKNGQKVYFLTFDDPEELLEDPVLREANKKELLN
VSVVRYSSEWENTFMIMEDGQINDSPLFDYLEQNSTFNKEQYQLEHTYDVGHCIVKAGAG
TGKTTTMINRIMFLKHMEHSLDLRTVVMITFTNEAATHMRSKLLQQLKNYYDLTKDKKYL
AWMEEAGDMFIGTIHSFAKGFLVTEGQALGFSRSMQVRSYKHERRKLIEKYIDQFSVECP
EIYERFRKIPHYQIIRSFTDMIEQIHNKSIPVESIQRLDFGIDIHGFHEFANYVIKRAIQ
ELDEQKKVEETLEISDLISRLVLLKDLPSDQLRLSIRYLFVDEFQDTDESQVAFVSWLVE
KYRCQLFAVGDIKQSIYRFRGADYTAFRQLQQQLKTANQEYKEYSLRKNYRSTPTLLKQF
NVLFQKWTKVVEKFQFDGTDKLIPVQEESCQEGLVTLHMDDTALKYLLRRLYNENVAVLV
RSNREVFEMVEKIENLGFFCEATLSGAFYRSLPVREFYLLLRRLTHPKVPKDRYLFHQSS
YGENELTIAKVLSAYTPEKPFVLDLLETFDRLDDPEYEWNTASTIAVLQKIIDIVQPHEV
FRLRYYGQLRTRFPDGDIEMQKKEAIAKMKEYKMNLDRLIYLLKKEFGDFQASLYDLEKF
LSIKMATDTTENELKLESNVSHRIKVMTVHKAKGLEFDYVLMPLTQSAFIKQGKTDLILV
PNSSQWKMGYRVHWNDFEFENNYYNEYVGSEKMETIVEEARLLYVALTRARKAVYANSSS
QMNPYQAQCWSDLLESGEMLVV
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggctaaatattcagtgctcatattttctcctgatattcaacaaacaacaaca
gatgaactttatcaatatattaaaaatggacaaaaggtttattttcttacatttgatgat
ccggaagaattgcttgaggatccggttctaagagaagcaaataagaaagaattattgaat
gtctcggttgtccgttattcatcggaatgggaaaatacatttatgataatggaagatggt
caaataaatgattctccattattcgattatcttgagcaaaatagtacttttaacaaagag
caataccaacttgaacatacatatgacgtaggacattgtattgttaaagcaggagcgggt
acgggaaaaaccacgacgatgataaatcgaattatgtttctaaagcatatggaacatagt
ctcgatttgcgtacggttgttatgataacatttacaaacgaagcggcaacccatatgcgc
tcaaagctattgcaacagctcaaaaattattacgatcttacaaaagacaaaaaatattta
gcgtggatggaagaagcaggcgatatgtttatcggaaccatccactcgtttgcgaaagga
ttcctagtaacggaaggacaagcattaggattttcacgatccatgcaggtgagaagttac
aagcatgaacggaggaagctcatcgaaaaatatattgatcaattttctgttgagtgtccg
gagatatacgaacgttttcggaaaatccctcactatcaaatcatccgttcatttacggat
atgattgaacagatacataataaatcgatcccggttgaaagtattcaacggctcgacttt
ggaatagatatacatggatttcatgaatttgcaaattatgtgattaagcgtgccattcaa
gaacttgatgaacagaaaaaggtggaagaaacattagaaataagcgatttaataagccgt
ctagtattgctgaaggatcttccttctgaccaattaagactttcgatccgttatttattc
gtcgacgaatttcaagataccgatgagtctcaagtagcgtttgtcagttggttggtagaa
aagtatcgttgtcagttgtttgcggtcggggatattaagcaaagtatttatcgtttccgc
ggagcagattatacggcatttcgtcaattgcaacagcaactaaaaacagcgaatcaagaa
tataaagaatattcactacgaaagaactatcgctccacaccaacattattaaaacaattt
aacgtcttatttcaaaaatggacaaaagtcgttgaaaagtttcagtttgacggtacggac
aagcttattcctgtacaagaggaaagctgccaagaaggattagttaccttacatatggat
gatacagcgttaaaatatttgcttcgtcgtttgtataatgagaatgttgccgtattagtt
cgctctaaccgtgaagtgtttgagatggtggagaaaattgagaatctaggattcttttgt
gaagcaaccttgtcaggtgctttttaccgttcattgccagtgagggaattttatttgttg
ctccgaagactgactcacccaaaggttccgaaagatcgttatttatttcaccaaagttcc
tacggggagaatgagctcactattgctaaagttttatctgcttatacaccagaaaagcct
ttcgttctggatttattagagacattcgatcgcttagacgatccggaatatgagtggaat
acggcatcaacgattgctgtgcttcaaaaaattattgacatagtacaaccacatgaagta
tttcgacttcgctattatggtcagttgagaacccggtttcctgacggagatattgaaatg
caaaaaaaggaagccattgcaaaaatgaaagaatacaaaatgaatttagatcgtctcatt
tatttattaaaaaaagaatttggcgatttccaagcttccttatatgatcttgaaaaattt
ttatctattaaaatggccacagatacaacggaaaacgaactaaaactagaaagcaatgtc
agtcatcgaattaaagtaatgaccgttcacaaagcaaagggattggagtttgactatgta
ttaatgccattgacacaaagcgcctttattaagcaggggaaaacggatttaatcttagtt
ccaaatagttcgcaatggaaaatgggatacagagttcattggaatgattttgagttcgaa
aataattactataatgaatatgtcggttcagaaaagatggagacaattgttgaagaagct
cggttgttatacgtagccttaacgcgtgcaagaaaagcagtttatgcgaacagttcctca
caaatgaatccataccaggctcagtgttggagcgacttgctagaaagcggggagatgttg
gttgtttaa
DBGET
integrated database retrieval system
