Aeribacillus pallidus: AP3564_16685
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Entry
AP3564_16685 CDS
T04993
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
apak
Aeribacillus pallidus
Pathway
apak00470
D-Amino acid metabolism
apak00550
Peptidoglycan biosynthesis
apak01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AP3564_16685 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AP3564_16685 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
apak01011
]
AP3564_16685 (murD)
Enzymes [BR:
apak01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AP3564_16685 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
apak01011
]
Precursor biosynthesis
Amino acid ligase
AP3564_16685 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox
AlaDh_PNT_C
ABC_tran
PTS_IIB
Motif
Other DBs
NCBI-ProteinID:
ASS92454
UniProt:
A0A223EB38
LinkDB
All DBs
Position
complement(3472808..3474148)
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AA seq
446 aa
AA seq
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MYVDQNVLVLGLAKSGLRAAKLLHKLGAHVTVNDMKPYEANDDVIELESLGIKLILGEHP
EQLLEEHNIDIVVKNPGIPYTNPIVQKAASQNIPVITEVELAYQISEAEIIAITGSNGKT
TTTTLIYEMLKADGKQPLLAGNIGNVACEVVQEATKEQIVVMEVSSFQLLGTIHFKPSVA
VLLNIFNAHLDYHGTRENYMQAKGKIFSNQDDQSVAVINSDDQDVVRLSELSNGKKIYFS
TNKEVSNGAYIKNESIWYDGEKIIDIKDIALVGKHNLENILAAICAVKAKNVGNKAIQKV
LASFSGVKHRLQYVGEVSGRKFYNDSKATNILATTKALEAFSSPVVLLAGGLDRGNEFDE
LIPYFKHVKAVITFGQTAPKIKKAAEKAGIELIEHVDNVEQAVFAAFRISDIGDVILLSP
ACASWDQYKTFEERGDIFINAVHKLK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtcgatcaaaacgttctcgtattaggtttggcgaaaagcggcttgagagccgct
aaattattgcataaactaggtgctcatgttaccgtaaacgacatgaagccatacgaagca
aatgatgatgtaatagaacttgaaagtttagggatcaaacttattttaggggaacatccc
gaacaattgctcgaggagcataatattgatattgttgtaaaaaatccaggcattccatac
acaaacccgatcgtacaaaaagcagcgagccaaaatattcccgttataaccgaagtcgag
cttgcgtatcaaatttctgaagcggaaattattgcgataactggatcgaatggaaaaacg
acgacgacaactttaatatacgaaatgctgaaggcagatggaaaacagccgctgctggca
ggaaatatcggaaatgtggcttgtgaagttgtgcaggaagcgacaaaggaacaaattgtg
gttatggaggtatcctcgtttcagcttttgggaaccattcattttaaaccttcagtcgcg
gtcttgttaaatatttttaatgcccatctagactatcatggaactcgcgaaaattatatg
caagcgaaaggaaaaattttttcgaaccaagatgaccaatcggttgcggttatcaattcg
gatgatcaagatgttgtgcgtctgtccgaactgtcaaacggaaagaaaatttatttttca
accaataaggaagtatcaaatggtgcttatatcaaaaatgaatccatttggtatgatggc
gaaaaaattattgatataaaagatattgctcttgtcggcaagcataacttagaaaatatt
ttggctgctatttgtgctgtaaaggcgaaaaatgttggaaacaaagcgattcaaaaggtg
ctggcatcgttttcaggtgtaaagcatcgcctgcaatatgttggagaagtttcaggaaga
aaattttataacgattcgaaagccacgaatattttggcaacaacaaaggctctcgaagct
ttttcatcccctgttgtattgttggccggagggcttgaccgggggaatgaatttgatgaa
ttaatcccgtatttcaaacatgtgaaagcagtcatcacctttggacaaactgccccaaaa
ataaagaaggctgcagagaaggctggaatagaactgatagaacatgtcgataatgtggaa
caagcagtctttgcggcgtttcgcatatcggatataggtgatgtcattttgctctctccg
gcctgtgcaagctgggatcaatataaaacattcgaagagagaggagacattttcataaac
gccgtgcataagctaaaataa
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