Aeribacillus pallidus: AP3564_18280
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Entry
AP3564_18280 CDS
T04993
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
apak
Aeribacillus pallidus
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apak03019
]
AP3564_18280
03009 Ribosome biogenesis [BR:
apak03009
]
AP3564_18280
Enzymes [BR:
apak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AP3564_18280
Messenger RNA biogenesis [BR:
apak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AP3564_18280
Ribosome biogenesis [BR:
apak03009
]
Prokaryotic type
rRNA helicases
AP3564_18280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Flavi_DEAD
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ASS91937
UniProt:
A0A223E9J8
LinkDB
All DBs
Position
complement(3780149..3781399)
Genome browser
AA seq
416 aa
AA seq
DB search
MAADFKDFPFQNFIIDAVQSLGFKEPTEIQAQMIPIILRGASAIGQSQTGTGKTHAYLLP
LINSICGEEKRVQVVVLAPTRELATQIYEEALKIIKFAPPEKELHAKLFIGGTDKMRAIE
KLKTQPHLVIGTPGRILDLVKEGALDLYSTKSIVVDEADLMLDLGFIYEVDQIASRMKKE
LQMLVFSATIPEKLKPFLKKYMENPEYVHVSPKQVHAKNITHVLVPLRHRNKIDLLYNMV
VSLNPYLALIFVNTKANAQDVAYGLAEKGLKVGQIHGGLTPRERKKEMRQIKDLAYQVVV
ATDLAARGIDIEGVSHVINAELPTDLDFYIHRTGRTARAGFSGFAYTIYEDDNEQMLQKL
EKMGIIFENRDIENGIWKTLDDRNRRQKRKKQPMETNAFIGIIKKPKSVKPGYKKR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgactttaaagattttccatttcaaaattttattatagatgccgttcagtcg
ttaggttttaaagaaccgactgaaattcaagcacaaatgatcccaatcatattaagagga
gcaagtgccatcggccaatcacaaacaggtacaggcaaaacacatgcttatttgctaccg
ttaatcaacagcatttgcggagaggaaaagcgtgttcaagttgttgttttagcacctacg
agagagcttgcgactcaaatttacgaagaagcgttaaaaatcataaaatttgccccgcca
gaaaaagaattacatgcaaaactttttattggcggtacagataaaatgcgggcgatcgaa
aagctaaaaactcagccccatcttgtgatcggaacacctggcagaattcttgatcttgtc
aaggaaggggcgctagatttatattcgacaaaaagcatagttgtggatgaagccgattta
atgcttgatttaggctttatttatgaggtcgaccaaatagctagccgcatgaaaaaagaa
ctgcaaatgcttgtgttttctgccaccattcctgaaaaattaaagccttttttaaaaaaa
tatatggaaaatcctgagtatgttcatgtatctccaaaacaagtacatgccaaaaacatc
acgcatgtccttgttccgctgcggcatcgaaacaaaatagatcttttatacaatatggta
gtttccttaaacccttatttagcgttaatttttgtgaatacaaaagcaaatgcccaagat
gtggcatacggtcttgccgaaaagggattaaaggttgggcaaatccacggcggtcttacc
ccgcgtgaacggaaaaaagaaatgcgtcaaattaaggatcttgcctatcaagttgtagta
gcaactgatttagctgcaagaggaattgatattgaaggtgtttcccatgtaatcaatgcc
gagctgccgactgatttagatttttatattcaccgaaccggaagaacggctcgggctggc
ttttcaggatttgcctatacaatctatgaagacgataacgaacaaatgctgcaaaagctt
gaaaaaatggggataatctttgaaaatcgagatattgaaaacggaatatggaaaacgctc
gatgaccgaaatcgcagacaaaaaagaaaaaaacaaccaatggaaacaaacgcgtttatc
ggaatcatcaaaaagccaaaatcggtaaaaccaggatacaaaaaaagatga
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