Aeribacillus pallidus: AP3564_19335
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Entry
AP3564_19335 CDS
T04993
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
apak
Aeribacillus pallidus
Pathway
apak03030
DNA replication
apak03410
Base excision repair
apak03420
Nucleotide excision repair
apak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AP3564_19335
03410 Base excision repair
AP3564_19335
03420 Nucleotide excision repair
AP3564_19335
03440 Homologous recombination
AP3564_19335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apak03032
]
AP3564_19335
03400 DNA repair and recombination proteins [BR:
apak03400
]
AP3564_19335
Enzymes [BR:
apak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AP3564_19335
DNA replication proteins [BR:
apak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AP3564_19335
DNA repair and recombination proteins [BR:
apak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AP3564_19335
NER (nucleotide excision repair)
GGR (global genome repair) factors
AP3564_19335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Enkurin
UBA_3
DUF3913
Tenui_N
HHH
Motif
Other DBs
NCBI-ProteinID:
ASS92132
UniProt:
A0A223EA52
LinkDB
All DBs
Position
complement(3999625..4002255)
Genome browser
AA seq
876 aa
AA seq
DB search
MTKKLVLIDGNSIAYRAFFALPLLNNDKGIYTNAIYGFTNMLLKVLEEEKPTHILVAFDA
GKTTFRHKTFKEYKGTRQKTPPELSEQLPFIRDLLDAYKITTYELENYEADDIIGTVARQ
AEKQDFEVKIISGDKDLTQLATEKTTVSITKKGITDVEPHTPESIQEKYGLSPAQIIDLK
GLMGDQSDNIPGVPGVGEKTAIKLLKQFETVENILNSIEEVNGKKLKENLQNYKEQALMS
KQLATIHCEAPVEIKIQDLEYKGYDKEKVVKIFKELGFQSLLDKMGEHENEEADEMPTIK
FEKVEKLSDKVLSEKAALLVEIIDENYHTGEIIGFSIANENGCFYIPAEIALHSKEFIEW
VKDETKRKVVYDAKKSIVALRWRNIDLAGIEFDVLIASYILNPSESIDDIAELAKTKNKH
LVQKDEVIYGKGAKRHIPDEDILGEHLARKALAIYELEELLIQELEENEQFHLFSELELP
LSAILSDMETTGVKIDVNRLKEMGKELDEQLKQLEKDIHRLAGVSFNINSPKQLGPILFE
KLNLPVLKKTKTGYSTSADVLEKLRGQHEIVEKILHYRQLGKLQSTYIEGLLKVVHRDTH
KIHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFIPSEKDWVIFAADYSQIELR
VLAHISGDEKLIEAFKQDLDIHTKTAIDVFHVEEDKVTSNMRRQAKAVNFGIVYGISDYG
LSQNLGITRKEAGEFIKKYFEIYKGVKEYMDGIIQEAKQKGYVTTLMQRRRYIPEITSRN
FNIRSFAERTAMNTPIQGSAADIIKKAMIDMAQEIEKRNLQTRLLLQVHDELVFEAPKDE
IEILEKLVPEVMENAIQLKVPLKVDYSYGSTWYEAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaagaagctagttttaattgatggaaacagtattgcttacagagcgtttttcgct
ttgccgcttttaaataatgataaggggatttatacgaatgcaatttacggctttacaaat
atgctgttaaaagtactggaggaagaaaaaccgacacatattcttgttgcatttgatgca
gggaaaacaacgttccggcataaaacttttaaagaatataaaggaactcggcaaaaaacc
ccgcctgaattgtcggagcagctaccatttatacgggatttgcttgatgcctacaaaatt
acaacatatgaactcgaaaattatgaggctgatgatattattggaacagttgcgagacaa
gctgagaagcaagattttgaagtgaaaattatttccggagataaggatttaacacagctg
gcaactgaaaaaacgaccgtttccatcacgaaaaaaggaattacagatgttgaaccgcac
acgcctgaatcgattcaagagaagtatgggctaagcccggcacaaattattgatttgaaa
ggattgatgggcgatcaatcagataatatcccaggtgtgcccggcgttggagagaaaacc
gcgattaaattgctgaaacagtttgagacagtcgaaaatattttaaattcgattgaagaa
gtaaatggaaaaaaattgaaggaaaacttacaaaactataaagagcaagcattaatgagc
aaacagcttgcgacaattcattgtgaagctcctgtcgaaataaaaattcaagaccttgag
tataaaggctatgacaaagaaaaagtagtgaaaatttttaaggaactaggcttccaatcg
ctcctagacaaaatgggagagcatgagaatgaagaagcggatgaaatgccgacgattaag
ttcgaaaaagttgaaaagctgtcagacaaggttttatcagagaaggcagctcttttagtg
gaaatcattgatgaaaattatcatactggagaaatcatcgggttttctatcgcaaacgaa
aatggatgtttttatattccagccgaaattgcgctacattcaaaagagttcatagaatgg
gtgaaggatgaaacaaagcggaaagtggtgtatgatgcgaaaaaatcaattgtggcgctg
cgctggcgaaacattgatttagcaggtattgagtttgatgttctcattgcctcatacatt
ttaaatccgtctgaatcgattgacgacatagccgagcttgccaagacaaaaaataaacat
ttagttcaaaaggatgaagtgatttacggaaaaggcgctaaacgtcatatccctgatgaa
gacattttaggcgaacatcttgccagaaaagcgttagccatttatgagctggaagaatta
ttaatacaagaattagaagaaaatgaacaatttcatttattcagcgaattggagcttccg
ctgtcagccattttatctgacatggaaacaacaggagtaaagatagacgtcaaccgtctg
aaagaaatgggaaaagagcttgatgaacagctgaagcaattagaaaaggatattcatcgt
ctagctggagtgtcatttaacattaattctccgaagcagcttgggccgattttatttgaa
aagctcaatctaccggttttgaaaaagaccaaaacggggtattcgacctctgcggacgtt
ttagaaaaattgagaggacagcacgaaattgtggagaaaattttgcattaccggcagctc
ggaaagcttcaatcgacgtatattgaagggctgctgaaggttgtccatcgtgatacgcat
aaaatccacacccgatttaatcaagcattaacgcaaaccggaagattaagctccacagac
ccgaatttgcaaaacattccgattcgccttgaggaaggccgcaaaattcgtcaagcattt
atcccttctgaaaaagattgggtcatttttgcagcggactattcccagattgaactgcga
gtgcttgcgcatatatctggagatgaaaaattgattgaagcgtttaaacaagatcttgat
attcatacaaaaacggcgatcgatgtgttccatgtcgaagaagataaagtgacctccaac
atgagaagacaggcaaaagcagttaatttcgggattgtttacggaatcagcgattacgga
ttgtcgcaaaacttaggaattacccgaaaagaagctggtgaatttattaaaaaatatttt
gaaatttataaaggcgttaaagaatatatggatggcataatccaagaggcgaagcaaaaa
ggctatgtaacgacactaatgcagcgtcggagatatattccggaaattacgagcagaaat
ttcaatatcagaagcttcgctgagcgaacagccatgaatactccgattcaaggaagtgca
gcggatattatcaaaaaagcgatgatcgatatggcgcaagaaattgaaaaacgaaatttg
caaacgaggctgctgcttcaagttcatgacgaattggtgtttgaagcgccaaaggatgaa
attgaaattttagaaaagcttgttccggaagtaatggaaaatgccattcagctaaaagta
ccgttaaaggttgattattcttacggttctacgtggtatgaagcgaaataa
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