Alteracholeplasma palmae: BN85404790
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Entry
BN85404790 CDS
T03096
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
apal
Alteracholeplasma palmae
Pathway
apal03030
DNA replication
apal03410
Base excision repair
apal03420
Nucleotide excision repair
apal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN85404790 (polA)
03410 Base excision repair
BN85404790 (polA)
03420 Nucleotide excision repair
BN85404790 (polA)
03440 Homologous recombination
BN85404790 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apal03032
]
BN85404790 (polA)
03400 DNA repair and recombination proteins [BR:
apal03400
]
BN85404790 (polA)
Enzymes [BR:
apal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN85404790 (polA)
DNA replication proteins [BR:
apal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BN85404790 (polA)
DNA repair and recombination proteins [BR:
apal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BN85404790 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN85404790 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
NuA4
HHH
Motif
Other DBs
NCBI-ProteinID:
CCV64056
UniProt:
U4KRD1
LinkDB
All DBs
Position
506019..508688
Genome browser
AA seq
889 aa
AA seq
DB search
MEHLTLVDGNSVMFRAYYATAYPGAVLMQTSQGVYTNAVFAFVNMMDKILEQTNGHILVA
FDTAHPTKRHEKYQEYKAGRAAMPEELAQQIPLVKKYLDKAGIKQHEQIGYEADDIIGTL
AKEASQNNIKVDVYSSDRDLLQLVDQNITVHLLKKGMKELDHYTPESLYEKYELTHHQMI
DLKALMGDPSDNIPGIPGVGEKTAIKLLKEYETIENLYVHQDEIKGKMGEKIRENKELAY
LSKDLVTINVESPLPFSYLETEKIKIETSDLIDFFKELELKQLVVRMANQNQNTLFKDEE
KSDKKTDKSFSYDLILNDEKLNDIIFNHQEPMSIHFEFSEPNYHKAELWGIGLSNGENTY
FIDPSIALNNQTFLNYLKNKEIEKYTFDYKAIKVFLMWHKKAIHTISFDMLLAAYLIKSS
IGKEDFTTITSLFSSIDISYEEQIYGKGAKKGLPENKELYYEHIAKKASVIYKLKDDLLE
TLKDQNQLELLQKVEIPLSEVLASMEFSGLLVDNKELLNQKEVLEKRINVLEESIYKEAG
ETFNISSPKQLGDILFEKLNLSQGKKTKTGYSTNVEVLEKLKDEHPIIPYIMEYRQLAKL
YSTYIIGISQSIFSDNKVHTIFNQALTTTGRLSSIEPNLQNIPIRTEEGRKIRKIFVAEK
NHYLLGADYSQIELRVLADIANVKHLKESFLNNEDIHKSTAQKVFHVTDVTSEQRRQAKA
VNFGIIYGIGAWSLAEDIHVSPKEAQMFIDRYLEIYPEIKQYMQDTVEFATENGYVKTLM
NRRRYIPEINSKVFMQKEFGKRNAMNAPIQGSAADIIKVAMVDLFKYLEENDKKSKIILQ
VHDELILEVPEEELEEMKELVPAIMKKAVKLTVSLETSCDVGKNWYELK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggaacatttaacattagttgatggtaactcagtaatgtttagagcatattatgcaact
gcatatccaggagcggttctaatgcaaacaagtcaaggcgtttatacaaatgcagttttt
gcctttgttaatatgatggataaaatattagaacaaaccaatggacatatactggttgca
tttgatactgcacaccctactaaaagacatgaaaagtatcaggaatataaagcaggtaga
gcggctatgccagaagaacttgctcaacaaataccccttgtaaaaaaatatttagacaaa
gctggtattaaacaacatgaacaaattggctatgaagcagatgacattatcggtacactt
gctaaagaagcgagtcaaaataatataaaagttgatgtatactcaagtgatagagaccta
ctccaattagtagatcaaaatattacagttcatcttttaaaaaaaggaatgaaggaatta
gatcactatacacctgaaagtctttatgagaagtatgaattgactcatcatcaaatgatt
gatttaaaagctcttatgggtgatccatcagacaacatccctggtattcctggtgtgggt
gaaaaaactgcaatcaaactgttaaaagaatatgaaacaattgaaaatttatatgtccac
caagatgaaataaaaggtaaaatgggagaaaaaattagagaaaataaagaacttgcttat
ctaagtaaagatttagtaactattaatgttgaatctcctttgccatttagttatttagag
acagaaaaaataaaaattgaaacttcagatttaattgatttttttaaagaattagagtta
aaacaacttgttgttagaatggctaatcaaaatcaaaatactttatttaaagatgaagaa
aaaagtgataaaaagactgataaaagtttttcatatgatttaattctaaatgatgaaaaa
ttaaatgatataatctttaatcaccaagaaccaatgtctatacattttgaatttagtgaa
cctaattaccataaagcagaattatgggggataggactttcaaatggagaaaatacatat
tttattgatcctagcatagcacttaataatcaaacttttttaaattatcttaaaaataaa
gaaattgaaaaatatacatttgactataaggcaattaaagtgtttttaatgtggcataaa
aaagctattcatactatcagctttgatatgttattagcggcttatttaattaaatcatcc
attggtaaggaagactttacaacgattactagtctattttcttcaatagatatttcatat
gaagaacaaatatacggtaagggtgctaaaaaaggtttaccagaaaataaggaactatat
tatgaacatattgctaaaaaagctagtgttatttataagttaaaagatgatttactagaa
accttaaaagatcaaaaccaattagaattattacaaaaagtagaaataccactttcagaa
gtactagcttcaatggagtttagtggtcttctagtagataataaggaacttcttaatcaa
aaagaagtattagaaaaaagaatcaatgtactagaagagtctatatataaagaagcgggt
gaaacctttaatatttctagccctaaacaattaggtgatattttatttgaaaagcttaat
ctatcccaaggcaaaaaaacaaaaactgggtattctacaaatgttgaagtattagaaaaa
ttaaaagatgaacatccaattattccttatattatggaatatagacaacttgctaaacta
tattctacatatattataggtatttcacaaagtattttttcagataacaaagtgcataca
atatttaatcaagctctaacaacaaccggacgtctatcttcaattgaaccgaacttacaa
aatattcctattagaacagaagaaggaagaaaaattagaaaaatatttgtagcagagaag
aatcattatttactaggtgccgactattcacaaattgaactaagagtattagctgatatt
gcaaatgttaaacatctaaaagaatcatttttaaataatgaagatattcataaaagtaca
gctcaaaaagtttttcatgtaactgatgttacaagtgaacaaagacgccaagctaaagct
gtaaactttggaattatctatggcattggagcatggagtttagcggaagatattcatgtg
agcccaaaagaagcacaaatgtttatagatagatatcttgaaatatatccagaaataaaa
caatatatgcaagatacagttgaattcgcaacagaaaatggctacgtaaaaacattaatg
aatagaagaagatatattccagaaattaattctaaagtatttatgcaaaaagaatttggt
aaaagaaacgcaatgaatgcacctattcaaggaagtgcagctgatattattaaagttgcg
atggtagatttatttaagtatttagaagaaaatgacaaaaaaagtaaaatcattcttcaa
gtacacgatgagctcatcttagaagtacctgaggaagaattagaagaaatgaaagagtta
gtacctgctattatgaaaaaggctgtaaaacttacagtatcattagaaacatcatgtgat
gttggaaaaaattggtatgaactaaaatag
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