Alteracholeplasma palmae: BN85405710
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Entry
BN85405710 CDS
T03096
Symbol
rumA
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
apal
Alteracholeplasma palmae
Brite
KEGG Orthology (KO) [BR:
apal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apal03009
]
BN85405710 (rumA)
Enzymes [BR:
apal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BN85405710 (rumA)
Ribosome biogenesis [BR:
apal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BN85405710 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_31
Cons_hypoth95
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
CCV64148
UniProt:
U4KKL5
LinkDB
All DBs
Position
624688..625788
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AA seq
366 aa
AA seq
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MIKRTIDSPDRVSEKSNLGSLDLSHLSFERQLVWQKELTEGTLKRALKQDVKVLDTLTDN
NPFNYRNKVVFHVLEDEFLQLGLYTTEPVKLVKVDNFILANKIVNEILTKINKAKIKVDP
FKLKHVVFKNNSQNQLVVTLVSTNKNFLGKDELISLLETFKQVIGITINIKPNDKVILGH
KSYEVSGTSELKEDELYITDKSFLQVNLPVMKMTYDVISKNITGKKIIDAYCGVGSIGFY
LYKKNPNLTIDMIDNQVDNILLANKTKRENDYKSVNIIKDNSEDAVEGLSADTLVLDPPR
QGLMPKLVDTILDKKFKEIIYLSCDLKTLTRDLRLLTSTYEIKTIQPIKMFPQTTSLETL
VVLKLK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaagaacaattgatagtccagatagagtttcagaaaaatcaaatttaggaagc
ctagatttatcacatctttcatttgaaagacaattagtatggcaaaaagaattaacagaa
ggaactttaaaaagagctttaaaacaagatgttaaagttctagatactttaacagataat
aatcctttcaattacagaaataaagtagtatttcatgttttagaagatgaatttttacaa
cttggtttatacacaacagaaccagttaaactagttaaggtagataatttcattttagct
aataaaatagtcaatgaaattttaactaagattaataaagcaaaaataaaagtagatcca
tttaaacttaaacacgttgtttttaaaaacaatagtcaaaatcaattagttgtaacactt
gtaagtactaataaaaactttttgggaaaagacgaactgattagtttactagaaacattt
aaacaagtaattggtattacaattaatattaaaccaaatgataaagtaatcttaggacat
aagagttacgaagtttctggaacaagcgaattaaaagaagatgaactatatatcactgat
aaaagctttttacaagtgaatttaccagtgatgaaaatgacttatgatgtaatatcaaaa
aatattacaggtaagaaaattattgatgcttactgtggtgtaggtagtattgggttttat
ctatataagaaaaatcctaatcttacaatagatatgattgataatcaagtggataatatt
ttattagcaaataaaacaaaacgcgaaaatgattataaatcagttaatattatcaaagat
aactcagaggacgcagttgaaggtttaagtgcagatactttagtattagatccaccaaga
caaggattaatgcctaaacttgtagatactattttagataaaaaatttaaagaaattatt
tatttatcatgtgatttaaaaacattaactagagatttaagattattaactagtacttat
gaaattaagacaatacaacctataaagatgttcccacaaacaaccagtttagaaacatta
gttgttttaaaattaaaataa
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