Alteracholeplasma palmae: BN85405870
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Entry
BN85405870 CDS
T03096
Symbol
recO
Name
(GenBank) DNA repair protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
apal
Alteracholeplasma palmae
Pathway
apal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BN85405870 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apal03400
]
BN85405870 (recO)
DNA repair and recombination proteins [BR:
apal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN85405870 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BN85405870 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
RE_LlaJI
Motif
Other DBs
NCBI-ProteinID:
CCV64164
UniProt:
U4KKC7
LinkDB
All DBs
Position
636924..637586
Genome browser
AA seq
220 aa
AA seq
DB search
MDTKTNKIKGIIYKVLPYKESAKMVFVYTEKGKYTLIFQGAQKTNNLNRAITQYLSLIEF
ELNPMGKRMMNISQAKLLDSYDKLKDSYDTTKKYATILELLDKVVTDEDEHETIFKIALE
ALSDTKIGYLRFLARLLPVIGYHFNLKPDGRKIKGYSLLLNRLIYKEETESIILDVVATT
ELLKLFINKQTDAFTQEDQLSSFLIKYYDYYLQYQFKTMK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggataccaagacgaataaaataaaaggtattatttataaagttttaccgtataaagaa
agtgccaaaatggtctttgtttacactgaaaaaggtaaatatactttaatttttcaaggg
gcacaaaaaacaaataatcttaatagagctattactcaatatttatcactgattgaattt
gaattaaaccctatgggtaagagaatgatgaatatcagccaagccaaacttttagactca
tatgataaactaaaagatagctatgatacaactaaaaaatacgcaactattttagaactc
ttagataaagttgttacagatgaagatgagcatgaaaccatcttcaaaatagccttagaa
gctctttcagatactaaaataggctacttaagatttcttgcaagactcttgccagttata
ggctatcattttaatttaaaaccagatggaagaaaaattaagggctatagtctattatta
aatagactgatttacaaagaggaaacagaaagtatcatacttgatgtcgtagctacaacc
gaactattaaaattatttattaataaacaaacagatgcgtttacacaagaagatcaatta
tcatctttcttgattaaatattatgattactatttgcaatatcaatttaaaacaatgaaa
taa
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