Alteracholeplasma palmae: BN85407960
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Entry
BN85407960 CDS
T03096
Symbol
rumA
Name
(GenBank) putative 23S rRNA (Uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
apal
Alteracholeplasma palmae
Brite
KEGG Orthology (KO) [BR:
apal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apal03009
]
BN85407960 (rumA)
Enzymes [BR:
apal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BN85407960 (rumA)
Ribosome biogenesis [BR:
apal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BN85407960 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
Methyltransf_31
DOT1
MTS
N6_N4_Mtase
RrnaAD
Methyltransf_25
PrmA
MetallophosC
Motif
Other DBs
NCBI-ProteinID:
CCV64373
UniProt:
U4KKZ0
LinkDB
All DBs
Position
873022..874182
Genome browser
AA seq
386 aa
AA seq
DB search
MNKIVVQFDDSSFDMHKSSPFENMPYKKQLEVKDEYLKQLFKEVNYDLSQHHIVENPSPE
FYRHKVILSAVNIKKNNKFELKLGLFIEGSKQIDPKINHHIQDKEINDALIKIEKILLKY
KIRAHNRFEPKGTLKHVLMRKSASTGKMLLVLVTQSTLLPNHKLIVKDIISECPNIMTVV
QNIQDRETPVVLGDKDKILYGKGYIYDEIDGIEFRIHYKSFYQVNPYQMKNLYHYALEQA
NLNKNDMVVDTYSGIGTITLLASVKAKQVIGIEVNQNAVLDAKFNQVLNNIENVEFICDD
VERSLVNIKQIDTLIMDPSRDGASRNFLETVLRIKPKKIVYISCDPKTQIRDLKSLLNDY
EIKSVQGFDMFSYTAHVENVVLLSLK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatagtagttcaatttgatgattcaagttttgatatgcataaatcaagtcct
tttgagaatatgccttataaaaaacaattagaagtcaaagatgagtatttaaaacaatta
tttaaagaagttaactatgatctgagccaacatcatattgtagaaaatccatcacctgaa
ttttatagacataaagttatattgtcagcggttaatattaaaaaaaataataagtttgaa
ttaaaactaggtttatttattgaaggaagtaaacaaatagatcctaaaattaaccatcat
attcaagataaagagattaatgatgctttaataaaaatagaaaaaatattactaaaatat
aaaattagagcacataatagatttgaacctaaaggtactttaaaacatgtacttatgaga
aaatcagcaagtactggaaaaatgttattagttttagttacacaatctacgttactgcct
aaccataaattaattgtaaaagacattattagcgaatgtcctaatatcatgacagtggtt
caaaatattcaagatagagaaactccagtagttctaggtgataaggataagattctatac
ggaaaaggctatatttatgatgaaattgatggcatagaatttagaatacactataaatca
ttttatcaagtgaatccataccaaatgaaaaatctatatcactatgcattagaacaagca
aatcttaataaaaatgatatggttgttgatacatacagtggaataggcacaatcacttta
ttagcttctgttaaagctaaacaagtcattggtattgaagtgaaccaaaatgctgtttta
gatgctaaatttaatcaagttttaaataatattgaaaatgttgaatttatttgtgatgat
gtagaaagaagccttgttaatatcaaacaaattgatacattaattatggacccttcaagg
gatggggcaagtagaaatttcttagaaactgttcttaggattaaacctaaaaaaattgta
tatatatcttgtgatccaaaaacacagattagagatttaaagagtttattaaacgactat
gaaattaagagtgtacaaggatttgatatgttctcgtataccgcacatgtggagaatgta
gtattgctttccttgaaatag
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