Alteracholeplasma palmae: BN85410680
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Entry
BN85410680 CDS
T03096
Symbol
nfo
Name
(GenBank) Endodeoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
apal
Alteracholeplasma palmae
Pathway
apal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN85410680 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apal03400
]
BN85410680 (nfo)
Enzymes [BR:
apal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BN85410680 (nfo)
DNA repair and recombination proteins [BR:
apal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BN85410680 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
AOX
Motif
Other DBs
NCBI-ProteinID:
CCV64645
UniProt:
U4KQI6
LinkDB
All DBs
Position
complement(1175811..1176698)
Genome browser
AA seq
295 aa
AA seq
DB search
MIKIGSHVSMSGDNMYYGSVLEALKYQSTAFMIYTGAPQNTIRKDISRLKINEALEKMEE
SGLDVKNVVVHAPYIINLANPDIEKREFGIFFLTEEVKRTAAMQVSQIVLHPGSAVGKDR
EQAIKWIAEGINQVFSNTKGLKVKIALETMAGKGNEVGKTFSELKSIIDLIEDKNRISVC
FDTCHTHDAGYDIKNNFKDVIKEFDDIVGKQYISVFHINDSKNETNSHKDRHENIGFGHI
GFDALMEVVYDEDFKDIPKILETPYVEDHAPYKEEIEMIREKKFNPNLKELITKG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaattggtagtcatgtttcaatgtctggagataatatgtattatgggtcagtt
ttagaagccttgaaatatcaatcaactgcattcatgatttatacaggagctcctcaaaat
accattagaaaagatattagtagattaaaaattaatgaagcgttagaaaaaatggaagaa
tcaggattagatgtaaaaaatgtagttgtccatgctccgtatattattaatctagcaaac
ccagatatagaaaaaagagaatttggaattttctttttaacagaagaagttaaaagaaca
gcagcaatgcaagtgagccaaattgttttacatccaggaagtgctgttggaaaagataga
gaacaagcaattaaatggattgctgaaggcattaatcaagtcttttcaaatactaaagga
ttaaaagttaaaattgctttagaaactatggctggtaaaggaaatgaagttggaaaaact
ttttctgaattaaaatcaattattgatttaattgaagataaaaatagaattagcgtatgc
tttgatacatgtcatactcatgatgctggttatgatattaaaaataactttaaagatgtt
ataaaagaatttgatgatattgtaggaaaacaatatatttcagttttccatattaacgat
tctaaaaatgaaaccaatagccataaagatagacatgaaaacattggttttggtcatata
gggtttgatgctttaatggaagttgtttacgatgaagattttaaggatattcctaaaatt
cttgaaactccatacgttgaagatcatgccccatataaagaagaaattgaaatgattaga
gaaaaaaagtttaatcctaacttaaaagaactcatcacaaaaggataa
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