Alteracholeplasma palmae: BN85413230
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Entry
BN85413230 CDS
T03096
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
apal
Alteracholeplasma palmae
Pathway
apal03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apal00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN85413230 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apal03021
]
BN85413230 (rpoA)
03400 DNA repair and recombination proteins [BR:
apal03400
]
BN85413230 (rpoA)
Enzymes [BR:
apal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN85413230 (rpoA)
Transcription machinery [BR:
apal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN85413230 (rpoA)
DNA repair and recombination proteins [BR:
apal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN85413230 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
HTH_6
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
CCV64900
UniProt:
U4KQN7
LinkDB
All DBs
Position
complement(1440293..1441285)
Genome browser
AA seq
330 aa
AA seq
DB search
MKDLKFEKPSAVEEISVDGNKGKFVIRPLERGYGVTIGNALRRVLLSSLPGAAIVNTKID
GVEHEFSTISGVYEDVMEIVLNLKKVVFSVDSDDSQYEQKLELYAVGPGVVTAADFNRVD
GVTVINPDQVIANLAEDGKLSMVVTIRRGIGYVSAENNKVYSKYEVGVIPIDSLYTPVER
VSYHVEKTRGDSDELTIEIETNGAIDVKEALSLASKMLVDYFNVIVQIGEQASQKDFIYE
PTEEPSSKKLEMRVEQLDLSVRLFNSLKRSGIATVAELVKLTEEEVMRFRSLGRKSFKEL
KEKLAENGLEFEHSMSKDSRFDLDYDEDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttaaaatttgaaaaaccaagtgcagttgaagaaatatctgttgatggaaat
aagggtaaatttgttattagacctttagaaagaggatacggagtaacaattggtaatgct
ttaagaagagttttactatcttcattgccaggtgctgcaatcgttaatacaaaaattgac
ggtgtagaacatgaattttcaactatcagtggagtttacgaagacgtaatggaaatcgtc
cttaatttaaaaaaggttgtattctctgttgactctgacgactctcaatatgaacaaaaa
ttagagttatacgcagtcggacctggagttgtaactgcagctgactttaatcgcgttgat
ggcgtaactgttatcaatccagatcaagttattgcaaacttagctgaagatggaaaacta
tctatggttgtcacaattagacgtggaatcggatatgttagcgcagaaaataataaagta
tatagtaaatacgaagtgggagttattcctattgactcattatatacgccagtagaaaga
gtatcttatcatgttgaaaaaacaagaggagatagcgatgaattaacaattgaaattgaa
actaatggtgctatcgatgtaaaagaagcattatcattagcttcaaaaatgttagttgat
tattttaatgtaatcgttcaaattggagaacaagcatctcaaaaagattttatatatgaa
ccaacagaagagccaagtagtaagaagttagaaatgagagttgaacaacttgatttatca
gttagactatttaacagtctaaaacgttcaggaattgcaacagttgctgaattagtaaaa
ctaactgaagaagaagtaatgcgctttagaagtttaggacgtaaatcatttaaagaactt
aaagaaaaacttgctgaaaatggcttagaatttgaacatagcatgagcaaagattcaaga
tttgatcttgattatgacgaagataaggagtaa
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