Alteracholeplasma palmae: BN85413780
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Entry
BN85413780 CDS
T03096
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase (SHMT)
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
apal
Alteracholeplasma palmae
Pathway
apal00260
Glycine, serine and threonine metabolism
apal00460
Cyanoamino acid metabolism
apal00630
Glyoxylate and dicarboxylate metabolism
apal00670
One carbon pool by folate
apal00680
Methane metabolism
apal01100
Metabolic pathways
apal01110
Biosynthesis of secondary metabolites
apal01120
Microbial metabolism in diverse environments
apal01200
Carbon metabolism
apal01230
Biosynthesis of amino acids
apal01240
Biosynthesis of cofactors
Module
apal_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
apal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BN85413780 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BN85413780 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN85413780 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BN85413780 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BN85413780 (glyA)
Enzymes [BR:
apal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BN85413780 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CCV64955
UniProt:
U4KQP8
LinkDB
All DBs
Position
complement(1484914..1486152)
Genome browser
AA seq
412 aa
AA seq
DB search
MSLKSFDNELFLSIEKEGLRQEEHIELIASENFVSKNVLEAQGSVLTNKYAEGYPGKRYY
GGCENVDVVETLAINRLKQIFDANYVNVQPHSGSQANAAVYQALLEPNDVILGMSLDAGG
HLTHGYKLNFSGRNYKAYSYGLNKETELIDYDELRKIALEVKPKVIVAGASAYSRIIDFK
KFREVADEVGAYLFVDMAHIAGLVAAKLHPSPMPYADVVTSTTHKTLRGPRGGIILTNKE
DIAKKIDKAVFPGVQGGPLMHVIAAKAVSFKEALDPSFNLYQQQVQKNAKILASELSKLG
YRIISKTTDNHMVLVDVKSKLNITGKKAEDILHEVNITCNKNSIPFDTEKPAYTSGIRLG
SPAMTTRGFKEEEFRVIAHLIDDALNNRDDLEKLLEIKKEVLRLTSQFPLYK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaaatcatttgataatgaactatttttaagtatagaaaaagaaggattaaga
caagaggaacatatagaactaatagcatctgaaaactttgtttcaaaaaatgtattagaa
gcccaaggatctgttttaactaataaatacgcagaaggttatccaggtaaaagatattat
ggtggatgtgaaaatgtagatgttgttgaaacacttgcgattaatagattgaaacaaatt
tttgatgcaaactatgtcaatgtacaacctcattcaggatcacaagcaaacgctgccgta
taccaagcattattagagcctaatgatgtcattttaggtatgtcacttgatgctggagga
catttaacacatgggtataaacttaatttttcaggaagaaattataaagcttactcatac
ggattaaacaaggaaactgaattaattgattatgatgaattaagaaaaatagctttagaa
gttaaacctaaagtcatagttgcaggagcgtctgcttattctagaattatagactttaaa
aagtttagagaagttgctgatgaagtaggtgcttatttatttgtagatatggcacacatt
gctggactggttgctgctaaactgcacccatcaccaatgccatatgctgatgttgttaca
tcgactactcataaaaccttaagaggtcctcgtgggggaattattttaacaaacaaggaa
gatattgctaaaaaaatagataaagcggtttttccgggtgttcaaggtgggccattaatg
catgtgattgctgctaaggctgtttcatttaaagaagcattagatccttcttttaatcta
taccaacaacaagttcaaaaaaatgctaagatattagcttctgaactttcaaagttagga
tatagaattatttctaagactactgataatcatatggttttggttgatgttaaatctaag
ttgaatattacaggtaaaaaagcagaagatattttacatgaagtcaatattacatgtaat
aaaaatagcattccttttgatacagaaaaacctgcatatacaagtggtattagattaggt
agccctgctatgactactagaggatttaaagaagaagagtttagagtgattgcacattta
atagatgatgctttaaataatagagatgatttagaaaaattattagagattaaaaaggaa
gtacttagattaacaagtcaatttcctttatataaataa
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