Alteracholeplasma palmae: BN85414120
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Entry
BN85414120 CDS
T03096
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
apal
Alteracholeplasma palmae
Pathway
apal03030
DNA replication
apal03430
Mismatch repair
apal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN85414120 (dnaX)
03430 Mismatch repair
BN85414120 (dnaX)
03440 Homologous recombination
BN85414120 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apal03032
]
BN85414120 (dnaX)
03400 DNA repair and recombination proteins [BR:
apal03400
]
BN85414120 (dnaX)
Enzymes [BR:
apal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN85414120 (dnaX)
DNA replication proteins [BR:
apal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN85414120 (dnaX)
DNA repair and recombination proteins [BR:
apal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN85414120 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_5
DNA_pol3_gamma3
RCF1-5-like_lid
TIP49
AAA_22
Rad17
AAA_30
DUF815
AAA_2
AAA_7
AAA_19
AAA_assoc_2
AAA_14
AAA_16
AAA_18
AAA_24
PIF1
Mg_chelatase
nSTAND3
Cytidylate_kin
RNA_helicase
SNAP-25
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CCV64989
UniProt:
U4KLV0
LinkDB
All DBs
Position
complement(1522453..1524120)
Genome browser
AA seq
555 aa
AA seq
DB search
MSYVALYRSYRPQTFSEVAGQKMIVQTLTNAIKHDKIAHAYLFSGPRGTGKTSIAKIMAK
AINCPHLVDGNPCNECEICKAINKNEVSDVVEIDAASNNGVDEIRDLRDKVNYAPSVGTY
KVYIIDEVHMLTTGAFNALLKTLEEPPKHVVFILATTEIHKIPATILSRCQRFDFKNIDQ
DDIVEKLKEIVLKEKININDQALKEIAIHSEGGMRDALSLLDQVISYKADDITEDDVLVV
SGGLSKKTITTILESVVLKKPQQAINELNNILKQGKDISRVTNDLILALRDILLDRTNKT
NLYEEFKLVPIQKIYAYLAILNELLQDIKWTNQKRAYIEMALIKMINHESVAKADLEAKV
EYLEIELEKLKSLPKQTQIVNKQVPYQATPKGKPLVTVKQVEDILRNSNKAKKELLLSAW
SRLEDYPLASLNGIAKMLYKGSLEAMTDDVMLLVYDSVILGKQMLKKEIKKQVLQILNQK
KELVKDYIVILKPDWLYLKEAYLAELNSGTAVAKLPEYDLHLYEDEISEEFETKEDPTVS
LAYEYFGKEKVKIKE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgttgcgttatacagaagttatagaccacaaacctttagtgaggtagctgga
caaaagatgattgtacaaacacttactaatgcaatcaaacatgataaaattgctcacgct
tatctttttagtggaccaagagggactggaaagacatctattgctaagattatggctaag
gcgattaactgtcctcacctagttgatgggaatccttgtaatgaatgtgaaatctgtaag
gctattaataaaaatgaagtttcagatgtagttgaaatagatgcggcatctaataatggt
gttgatgaaattagggatttaagagataaagtcaattatgcccctagcgttggaacatat
aaagtttatattatagatgaggttcatatgttaacaacaggtgcgtttaatgccctttta
aaaacattagaagaaccaccaaaacacgttgtctttattttagcaacaacagaaatccat
aaaataccagcaactattttatcccgttgtcaaagatttgatttcaaaaatattgatcaa
gatgatatcgtggaaaaattaaaagaaattgtgttaaaagaaaagattaacattaatgat
caagcattaaaggagatagctattcactcagaaggtggtatgcgtgacgctttaagttta
cttgatcaagtgatttcttataaagcagatgatattacagaagatgatgttttagttgtt
tcaggtggattatctaaaaaaacaattacaacaatcttagaatcggttgtcttaaagaaa
ccccaacaagctattaatgaattaaataatattttaaaacaaggcaaggatatttcaaga
gtaacaaacgatttaattttagctcttagagatattttattagatagaacaaataagaca
aatttatatgaagaatttaaacttgttcctattcaaaaaatatatgcttacctagctatt
ttaaatgaacttttacaagatattaaatggacaaatcaaaaacgtgcatatattgaaatg
gccttaattaaaatgattaatcatgagtcagtcgcaaaagcagatttagaagctaaagta
gaatatttagaaatagaattagaaaaactaaaaagtttacctaaacaaactcaaattgtt
aacaaacaagtgccttatcaggcaacacctaaaggaaaaccgcttgtgacagttaaacaa
gttgaagatatcctaagaaattcaaataaagctaaaaaagaacttttattatctgcatgg
agtagattagaagattatcctttagcctcattaaatggaattgctaaaatgctttataaa
gggtctttagaagcgatgacagatgatgtgatgttacttgtttatgatagtgtcatttta
ggtaaacaaatgcttaaaaaagagattaaaaaacaagttttacaaatactaaatcagaaa
aaagaattagtaaaagattatatagtgattttaaaaccagactggttatatttaaaagaa
gcatatctggctgaattaaattcaggaacagcggttgctaaattacctgaatatgactta
catttatatgaagatgaaatcagtgaagaatttgaaaccaaagaagacccaacagtttca
ttggcatatgaatattttggaaaagaaaaagtaaaaataaaggagtag
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