Andrographis paniculata: 127239441
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Entry
127239441 CDS
T08689
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
apan
Andrographis paniculata
Pathway
apan03022
Basal transcription factors
apan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127239441
09124 Replication and repair
03420 Nucleotide excision repair
127239441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127239441
03400 DNA repair and recombination proteins [BR:
apan03400
]
127239441
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127239441
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127239441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
SHOCT
Motif
Other DBs
NCBI-GeneID:
127239441
NCBI-ProteinID:
XP_051113550
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MADKQVVKRAKYKSSVKDPGVAGVLKMRMERFVFVPNDPTSATKLNVEFRTIKGHKFTKE
GSSKQALLNLTQDQGENYIFEFDSFSDRDACREYVATAIAHHSEAGRLVNEKSNVPVSNE
QLSRAETERRIKLLQENSELQALHKQLVFGGILTDDEFWATRKKLLDHSDSRKPKQRLAL
KNEMWSVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLNFVPNKMTEKEFWTKYSR
AEYLHSTKNVVAAAAEAAEDEELAVFLKQDDMLANEARRKIRQVDPTVDMKADEGDDYTH
LPDHGLLGDETKDVLESQYKPYRRSFAQDLNQHASVVLQGRLVDELGDTRSVAEALARTK
QAELSDEISNRNLEKELSDKICRMAEIEDLQGPRDTAVAPLSIKDPRDYFDSQHANALKA
LGDAGTGTKPLKSSVSSSKAYGSLRDLVSEIRGTGLSDPIMSHDVALKVLSGLTQNISST
RFHLGINPNESVLNRLPKVTKEELLHHWTSIQELLKHFWSSYPITTKYLYTKVTRLKDAM
SQVYPKLQEIKESVQSDFRHQVSLLVHPMLQALDAAFAHYEADAQRRSSKSGERPNGFT
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaacaagttgttaagcgtgccaagtacaagtcttcagtcaaggatcccggg
gtcgccggcgttctcaaaatgaggatggaaagatttgtgtttgtgccaaatgatcctaca
tcagccacaaagctaaatgtggagtttaggacgataaaaggtcataagtttacaaaggag
ggttcaagtaagcaggctctactaaatcttacccaagaccagggggaaaattacattttt
gagtttgatagcttttctgatcgagatgcatgccgggaatatgttgccactgctattgca
catcattctgaagctggaaggctggtcaatgaaaaatctaatgtccctgtgagcaatgaa
caacttagtagagcagaaaccgaacgaagaattaagctacttcaggagaatagtgaatta
caggcacttcacaagcaacttgtattcggagggatattgacagatgatgaattctgggct
acaaggaagaaattgctggaccacagtgatagccgaaagccaaagcagcgtttggcatta
aaaaatgaaatgtggagtgttaaaccattatctgatggtcagtccaacagagtgacgttt
aacttgacaccagaaatcattcatcagatatttgctgagaaacctgctgtacgccaggct
tatttaaattttgtcccaaacaagatgacagaaaaagagttctggaccaagtattcaaga
gctgaatatcttcacagcacaaaaaacgtagttgctgcagcagccgaagctgctgaagat
gaagagcttgctgtttttctgaagcaagatgatatgcttgcaaatgaggctaggagaaag
atcaggcaggttgatccaactgtagacatgaaagctgatgaaggtgatgattacactcat
ctaccggatcatggcttgcttggtgatgaaaccaaggatgtattggaatcacaatataag
ccatatcgtagatcctttgcacaagatctgaatcaacatgcttctgttgttcttcaggga
aggcttgtagatgagctaggagatacaaggtctgttgcggaggcccttgcgaggacaaaa
caagctgagttatctgatgagatatccaatcggaatttagaaaaagagctatcggacaag
atttgtagaatggctgagattgaagatctgcaagggccacgtgatactgcagttgctcct
ctcagcatcaaggatccacgggattattttgactctcaacatgctaatgcactaaaagca
ctgggagatgcaggtacaggtacaaaaccattaaaatccagcgtgagctcttctaaagct
tatggttccttaagggatctagtctcagaaatcagaggtactggattgagtgacccaata
atgagtcacgatgttgctcttaaggtccttagtgggttgacccaaaatatctccagcacc
aggtttcatctcggaatcaatccaaatgagagtgtcttgaacaggttgcctaaagtcact
aaagaggagcttttacatcactggacttctatccaagaattgctcaaacatttttggtca
tcatatcctattacaaccaagtacctctataccaaggtaaccagattgaaagatgcaatg
tcccaagtttatcccaagttgcaggagatcaaggaatctgtgcagtccgatttcagacat
caagtctcacttctagttcacccgatgcttcaggcgctggacgccgcgtttgcacactat
gaagcggatgcacagaggagatcttccaagagtggggaaaggccaaacggcttcacctga
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