Andrographis paniculata: 127240302
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Entry
127240302 CDS
T08689
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127240302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127240302
03009 Ribosome biogenesis [BR:
apan03009
]
127240302
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127240302
Spliceosome [BR:
apan03041
]
Complex A
U1 snRNP components
U1 related factors
127240302
Complex B
127240302
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
Pre-60S particles
Helicases
127240302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
127240302
NCBI-ProteinID:
XP_051114842
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MAAATASSSSARVRYAPDDPTLPKPWRGLVDSNTGYLYFWNPETKVTQYERPVAPSEASS
VPPQESLPEQQPSGHCSDKDGANACIKVEDNGSDTIASGVGLETCQTSSGGPDYPQNTPD
VKTNASCELYATKGVESGSSVESYRRQHEITVTGANVPQPFISFQATGFPAEILREMQCA
GFAAPTPIQAQSWPIALRGRDIVAIAKTGSGKTLGYLIPGFLHLKKRNSNPKLGPTVLVL
SPTRELATQIQDEAMKFGKTSKISCTCLYGGAPKGPQLKDLDRGVNIVVATPGRLNDIME
MRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKEVPSSRQTLMYTATWPKEVRRIAADL
LSNPVQVNIGNVDELAANKSITQYVEVLSPMDKRRRLEQILRSQEPGSKIIIFCSTKKMC
DHLSDNLTRQFGAAAIHGDKCQSEREHILNQFRTGRSPVLVATDVAARGLDVKDIRVVIN
YDFPTGIEDYVHRIGRTGRAGATGLAYTFFCSNDERHASDLIKLLERADQNVPAELRDII
SRGGGIGRGGPRRWSSSGYDGGHSGNYNSSFSGKSGGWGAPSSSDRDVGDHDNNEQHNSS
FGNNTDASGSAPYKSFHESMMAARSTRSNNQSCSTISPARNSGWGENHGRDRSRSPSPER
FGGPPPVRRSFHETMMLQQQQARPANQIQQEADTDGVGGSYHKSSTEKVGEEFAGGSNSN
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcaacagcttcctcatcatctgctcgtgtaagatatgcaccagatgacccc
accctccccaaaccatggagaggactagttgatagtaacacaggatacctttacttctgg
aatccagagaccaaagtaacccaatatgagaggcctgttgcaccttctgaagcaagctct
gttccacctcaagaatctttgcctgaacaacagccctcaggacactgcagtgacaaggat
ggtgcaaatgcatgtatcaaagtcgaggacaatggctcggatacaattgcatctggagta
ggattggaaacctgtcagacttcaagtggagggccagattatccacagaataccccagat
gtgaagacaaatgcttcatgtgaactctatgcaactaagggtgtggagtctggttcgtct
gtggagtcttaccgccgtcaacatgaaattactgttacaggagctaatgttccccaacca
ttcatttcgtttcaagccactggttttcctgcagagattttaagggagatgcaatgcgct
ggttttgctgctccgaccccaatacaggcacaatcatggccgattgctcttcgaggccgt
gatattgtagccattgccaagacaggttctggaaaaactctgggctacttgattcctggt
tttcttcatttgaaaaaaaggaacagtaatccaaagttaggtccaactgttttggtgttg
tctccaacaagagaattggctacacagatacaagatgaagccatgaagtttggaaaaaca
tccaaaatttcttgtacgtgtttatatggaggagcacctaaaggtcctcaattgaaagat
ctagatagaggtgtaaatattgtggtggctactcctgggcgattaaatgatattatggag
atgaggcgagttagcctccatcaagtgtcatatttggtattggacgaggcagataggatg
cttgacatgggttttgagccacagataaggaaaattgtgaaggaggtgccttcttcgagg
caaaccctgatgtatacagcaacatggccaaaggaggtgcgtcgaatcgctgcagatcta
ctgtctaatcctgttcaggtcaacataggaaatgtggatgaacttgctgcaaacaagtca
ataacccagtatgttgaagttttatcaccaatggataaacgccggcgcttggagcagata
ttgagatctcaagaaccagggtcgaagataataattttttgctccacaaagaaaatgtgc
gatcatctgtcagataatttgaccaggcaattcggagctgctgctattcatggagacaaa
tgtcaaagtgagagggagcacatattgaatcagttccgtacgggaaggtcaccagtgctt
gtagccactgatgttgctgctcgtggactggatgttaaggatatcagggtggtgataaac
tatgactttccaacaggaatagaggactatgtacaccgaattggtagaactggccgggca
ggtgctactggacttgcatacacatttttctgcagcaatgatgaaagacatgcatcagat
ctaatcaaactactggaacgagctgatcaaaatgtccctgctgaacttcgtgacataatt
tcacgtggaggtggcataggaaggggaggaccccgtaggtggagctcttctggatatgat
ggaggccatagtggaaactataattcttcattcagtggaaagtctgggggttggggggcg
ccatcttcttcagatagggatgtcggggatcatgacaacaatgagcagcataacagttcc
tttggaaacaacaccgatgcctctggaagcgccccgtacaaaagtttccatgaaagcatg
atggctgctagaagcaccagaagtaataaccaaagttgcagcaccataagccctgctcgg
aattcagggtggggtgaaaaccatggaagagatcgcagccgtagtcctagcccagagaga
tttggcggacctcccccagtgcgacgcagttttcatgaaactatgatgctgcagcagcag
caggctcggccagccaaccaaatccaacaggaagctgatactgatggagttggaggatca
tatcataaatcgtctacagaaaaagtgggtgaagaatttgcaggtgggtcgaactcaaac
tcctga
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