Andrographis paniculata: 127240567
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Entry
127240567 CDS
T08689
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
apan
Andrographis paniculata
Pathway
apan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127240567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127240567
03036 Chromosome and associated proteins [BR:
apan03036
]
127240567
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127240567
Coactivators
SAGA/TFTC/STAGA complex
127240567
Chromosome and associated proteins [BR:
apan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127240567
STAGA complex
127240567
TFTC complex
127240567
SAGA complex
127240567
SLIK complex
127240567
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Ge1_WD40
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
WD40_like
LisH
Cytochrom_D1
PROPPIN
Beta-prop_IP5PC_F
FluMu_N
Motif
Other DBs
NCBI-GeneID:
127240567
NCBI-ProteinID:
XP_051115261
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MDQEEIDRVVLAYLDKRGFRQAGLAFQQEKQQHSKGSNASSTAQIDLDVAKQMLALSEVD
VPAQYHDSYSKLRSWAYSSLDQYQHELVRLLYPVFIHAFMDLIGKGHIQEARGFFNNFRG
DHEVAHSRDLQKLEGVLSPSHLEEMEFAHSLRQTKANIKMCKYSYELLLQYLHKSQSITM
LGIVNEHINFIVFSGQPTSIADDTEFVTLFGDDQEAANAINQKEIHWGQLLEDSLEEKLE
KTGGSNVDSEKVDGEMREEVEEVKKRSVDGGKQGGTLKKLKKDKVSGAAAKASRSESAVV
SGAQRVKPELTMPVRPIELEHSILEDLRNRVQLNSTALPSISFYTFVNTHNSLNCASISH
DGSMLAGGFSDSSLKVWDMAKLGQPSGNSPLQGENESAPNEHMTSSSTGAGSYTLFRGHA
GPVHSATFHPYGDFLLSSSSDSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFATA
SHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHVNCNYIATGSSDRSVRLWDVQSGECVR
IFIGHRSMILCLAMSPDGRYMASGDEDGTIMMWDLATGRSVCPLVGHSSCIWSLAFSCEG
SLLASGSADCTVKLWDVTTSSKSPKTEEIKHGNTSRLRSLKAIPTKSTPVYSLQFSRRNL
LFAAGALSMP
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagaagagatcgatagagtggtgctggcatatttggataaaagaggttttagg
caagcgggtcttgccttccagcaggagaagcagcagcacagtaaaggcagtaatgcttcc
tcaactgcacaaatcgaccttgatgtcgccaagcaaatgctcgcactctcagaggttgat
gttcctgctcagtaccacgacagttatagcaaactccgttcatgggcgtatagttctctt
gatcaataccagcatgaattggttcgattgttatatccggtgttcatacatgcatttatg
gatcttattggaaagggtcatattcaagaagctcgaggtttctttaataactttcgaggt
gatcacgaagtggcacactctcgtgaccttcaaaagttagaaggtgttctctctccttca
catcttgaggaaatggaatttgcacattcccttaggcagacaaaagctaacattaagatg
tgcaaatattcctatgaactccttctgcaatacctgcacaagtcccaatcaattacaatg
cttggaattgtcaacgagcacatcaactttatagttttttctggacaaccaacttcaatt
gccgatgacacagaatttgtcacactgtttggagatgaccaggaagcagctaatgcaata
aatcagaaagaaattcactgggggcagttgcttgaagattccttagaagagaagttggaa
aagactgggggttctaatgtggattccgaaaaggtagatggagaaatgagagaggaagtg
gaagaagttaagaaaagatctgtcgatggtggcaaacaaggtggtacacttaaaaagcta
aaaaaggataaggtctctggagctgcagccaaagcttctcgttcggagagtgccgtagtt
tctggagcacaacgcgtcaagccagagttaaccatgccagtaaggccaatagaattggaa
cattctattcttgaagatttgaggaaccgtgtacaattgaatagcacagcattgccttcc
atcagcttctataccttcgtcaacactcataacagcttgaactgtgcttcaatttctcat
gatggttctatgctagctggtggattttctgactcatcattaaaggtttgggacatggca
aagcttgggcagccaagtggaaattctcctttgcagggagaaaatgagtcagcacccaat
gagcatatgactagctcaagcactggggcaggatcttatactttatttcgaggtcatgct
ggtcctgttcattctgccacttttcatccatatggcgattttcttctgtcatcatcatca
gattcaacagttcgattatggagcacaaaattgaatgcaaatcttgtttgctacaaggga
cacaattatcctgtatgggatgtacagtttagtccagtaggacactattttgctactgct
tcccatgatcggacagcaagaatctggtcgatggacagaatacagcctttaagaataatg
gcaggccatctatccgacgtagattgcgtgcaatggcatgttaactgcaactacattgca
accggatcaagtgacagaagcgtacgtttatgggatgtccagagtggggagtgtgttaga
atattcattggtcacagaagcatgatcctatgcttggcaatgtcacctgatggtcgttat
atggcatctggtgatgaagatggtacaataatgatgtgggatcttgcaactggtcgaagt
gtttgccctttagttggccacagctcttgcatttggtcacttgctttcagctgtgaaggt
tcacttctagcgtctggttctgccgattgcactgtgaaactatgggatgtaaccaccagt
tcgaagtcgccaaaaactgaagagatcaaacatgggaacacaagcagactcagatcatta
aaggccataccaaccaaatctactcccgtctactctctccagttctctaggcggaacctc
ttgtttgctgctggggcgctctcgatgccttaa
DBGET
integrated database retrieval system
