Andrographis paniculata: 127240716
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Entry
127240716 CDS
T08689
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A
KO
K12856
pre-mRNA-processing factor 8
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127240716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127240716
Spliceosome [BR:
apan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
127240716
Complex C
U5 SnRNP specific factors
127240716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
127240716
NCBI-ProteinID:
XP_051115496
LinkDB
All DBs
Position
Unknown
AA seq
2369 aa
AA seq
DB search
MYNNGQEMWSDGISNPAPPGTSVGGAMPPVMAPPGTSGAQPVAPPQPPVHPSYTVVPTES
QLDERARKWMQLNTKRYSDKRKFGFVEAQKEDMPPEHVRKIIRDHGDMSSKKFRHDKRVY
LGALKFVPHAVYKLLENMPMPWEQVREVKILYHITGAITFVNEIPWVVEPIYLAQWGTMW
IMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLEMDEEEDSAVYTWFY
DHKPLVKTKLINGPSYRKWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKAL
NMCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKL
SIYHTPMVMYIKTEDPDLPAFYYDPLIHPITSTNKDRRDKKIHEDEDDDDFVLPEGVEPL
LTDVPIYTDTTAAGISLLFAPRPFSMRSGRTRRAEDIPLVSEWYKEHCPPSYPVKVRVSY
QKLLKCFVLNELHHRPPKAQKKKHLFRSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLL
IHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLG
NVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGC
GFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRA
AVMHDVLDAMPEGIKANKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKA
DWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAV
AIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQQQREELGLI
EQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLW
YEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTSDGQCVVMLQTKFEKFFEK
IDLTMLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLV
LDLLLLGLTRASEIAGPPQMPNEFITYHDTRVETRHPIRLYSRYIDKVHILFRFTHEEAR
DLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITT
LEWENSFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTA
VAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLD
LLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQT
DVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLE
DLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWN
LNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGL
NQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIH
ESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVA
ESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGID
LAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQ
NYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSV
WAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKG
SELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVN
NEKAKMLLKPDKTVVTEPHHIWPSLSDEQWMKVEVALRDLILSDYAKKNNVNTSALTQSE
IRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGEELIVTTTSPYEQAA
FGSKTDWRVRAISATNLYLRVNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQIAG
YIYGVSPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHEFLNDLEPLGWMHTQPNELP
QLSPQDLAAHARVLSNNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGKSNTDAAN
NPHGYLPTYYEKVQMLLSDRFLGFYMTPDNGPWNYNFMGVKHTVGMKFGMKLGTPREYYH
EDHRPTHFLEFSNLEEGETAEGDREDTFT
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atgtataataacgggcaagagatgtggagcgacggtattagtaatccggcgccgccgggg
acgagtgtgggtggagcgatgccgcctgttatggcgccgcctggaactagtggagctcaa
ccggttgcgcctcctcagccgccagttcatccgtcttacactgttgtgccgactgagtcg
cagcttgatgagcgtgcgaggaagtggatgcagctgaacacgaagagatatagtgataag
cggaagtttggatttgttgaggcgcagaaggaggatatgcctcctgaacatgttagaaaa
attattagggaccatggtgacatgtcatcaaagaaatttaggcatgacaagcgtgtatat
ttgggagctcttaaatttgtaccccatgctgtatacaaacttttggagaatatgcccatg
ccttgggaacaggtccgtgaagtgaagatcctttatcatattactggggctatcacattt
gttaatgagattccatgggttgttgaaccaatttacttagcacagtggggtactatgtgg
attatgatgcggagagaaaagagggatagaagacatttcaagagaatgcgttttccacct
tttgatgatgaagagcctcccttggattatgctgacaatcttctagacgtagatcctttg
gagccaattcagttggaaatggatgaggaagaagattcagctgtttatacttggttctac
gaccataaacctcttgttaagacgaaacttattaatggacccagttaccggaaatggcat
ctctcgcttccaatcatggcaaccctgcaccgacttgctggacagttactctcggattta
attgatcgcaattatttttaccttttcgacatggaatcgtttttcacagccaaagcatta
aacatgtgcatacctggtggtcccaagtttgagccattgtatcgtgatatggagaaagga
gatgaggactggaatgaatttaatgacattaacaagcttatcatccgatcgcctttgagg
acagagtacaggattgcctttccccatctttataataataggcctaggaaagtaaagctc
agtatctatcacactccaatggtgatgtacataaaaactgaggatcctgatttgcctgca
ttctactatgatcctctaattcacccgataacaagtacaaataaagataggcgagataaa
aaaattcatgaagacgaagatgatgatgattttgttttgcctgagggagttgaacctctg
cttacagatgttccaatttatactgacactaccgctgctgggatttcactactgtttgcc
ccacggccctttagcatgcgttctggtcggacaagacgagctgaagatatacctctcgtg
tccgagtggtacaaagaacactgtcctccatcatatcctgtcaaagttcgtgtcagttat
cagaagctattgaagtgctttgtgttgaatgagctgcatcatcgaccgccaaaggctcag
aagaagaagcatttatttaggtctcttcaagctaccaaatttttccagacgaccgaactt
gattgggctgaagcaggtctccaggtttgcaagcaagggtacaatatgctgaacctgctg
atccataggaaaaatttgaactacctccatcttgattacaatttcaatttgaagcctgtg
aagactcttactactaaggaacgaaaaaagtcacggtttggtaacgcctttcatctttgt
cgtgagattctgcgtttgacaaagcttgttgttgatgcaaatatccagttccgtttggga
aatgtcgacgcattccagttggctgatgggttgcaatacattttttcacatgtgggtcag
ttaacgggtatgtaccgttacaaatacagactcatgcggcagattcggatgtgcaaagac
ttgaaacatttaatttattaccgctttaatactgggcctgttgggaaaggtcctggatgt
ggtttctgggcacctatgtggagggtgtggttgtttttccttcgtggcatagttcctctt
ttagaaaggtggttggggaatttgcttgctagacaatttgaaggaagacactcaaaagga
gtggctaaaactgtgactaagcaacgtgttgaaagccactttgatttggagcttcgagct
gctgttatgcatgatgtgcttgatgccatgccagagggtattaaggcaaataaagcaaga
actatccttcaacatttgagtgaagcatggcgatgctggaaagcaaatattccatggaag
gtacctggtttgcctgttcccattgagaacatgatacttcgttatgtcaagtcaaaagct
gattggtggacaaatgttgcacattataaccgtgagcgtattagaaggggagcaactgtt
gataagactgtttgccgtaagaatctcggaagactgacccgactttggttgaaggcagaa
caggagcgccagcacaactacttgaaagatggtccttatgtcaccccagaagaggctgtg
gccatatatacgacaactgtgcattggctggagtcaagaaaattctctccaattcctttt
cctcctttgtcttacaaacatgatacgaagctcctcattcttgccctggagagattgaaa
gagtcatacagtgtagctgttaggttaaatcaacaacagagagaagagttggggttgatt
gagcaagcttatgataacccacatgaagctttgtcacgtattaagcgtcatttgcttact
cagcgtgccttcaaagaggttggaattgaattcatggacttatatagctatttgattcct
gtttatgagattgaacccctggagaaaatcactgatgcatatctagaccaatatctttgg
tatgagggtgataaaaggcaccttttccccaattggataaagccagcagattcagaacca
ccaccactattggtctataaatggtgccagggcataaacaacttacaaggcatatgggac
actagtgatggccaatgtgttgtgatgcttcaaactaaatttgagaagttctttgaaaag
attgatttaaccatgctcaacaggcttctccgtttggttcttgaccataacatagctgat
tatgtcactgcaaagaataatgttgttctatcctacaaggacatgagccacacaaactcc
tatggactcatacgtggtcttcagtttgcatcatttgttgttcaatactatgggcttgtc
ctggatcttctcctccttggtctgactcgagctagtgagatagctggtccaccacagatg
cctaatgagtttattacatatcatgataccagagttgaaacacgacacccaatccgtttg
tactctcgatacatagacaaggtgcatatattgttccggttcactcatgaggaggctcgt
gaccttatccagcggtatcttacagagcatccagatccaaacaatgaaaatatggtcggt
tacaacaataagaagtgctggccacgggatgctagaatgcggctcatgaagcatgatgtt
aatcttggtcgaagtgtcttctgggatatgaagaatcggcttccaagaagtattacaacc
cttgaatgggagaacagctttgtctccgtctacagcaaagataatccaaacttgctgttt
agcatgtgtggttttgaggtgcgcatcttgcccaagataagaatgacgcaggaggctttc
agcaacacaagagacggagtttggaatctccaaaatgaacaaacaaaagaaaggactgca
gttgctttcttgcgtgttgatgatgaacacatgaaagtgtttgagaaccgagtaagacag
attctcatgtcctcaggttccacaacatttactaagattgtcaacaagtggaatacagct
cttataggcctcatgacatatttccgagaagcaactgtgcacacgcaagaattattggat
ttgcttgttaaatgtgaaaataaaatacaaactcgaattaaaattgggttgaattccaag
atgcctagcaggttcccacctgtcatcttctatacacccaaggaaattggaggacttggt
atgctgtcgatgggtcacattttgattccccagagtgaccttaggtacagtaaacagact
gatgttggtgtaactcactttaggagcggaatgagtcatgaagaggaccagttgattccc
aatttgtatcgatacattcagccttgggagagtgagttcatagattctcagcgtgtctgg
gctgagtatgcattaaaaagacaggaagcccaggcccagaataggcgactaacccttgag
gatttggaggattcatgggatcgtggtataccacgtattaacacactctttcagaaagac
cgtcacacccttgcatatgacaaagggtggcgtgtaagaacagatttcaagcagtatcaa
gtactaaaacaaaatccattctggtggacacaccaaagacatgatggaaagctttggaac
ttgaataattatcgaactgatgttattcaagctcttggaggtgttgaaggaattctggag
catacattgttcaaaggaacatacttcccaacatgggagggtcttttctgggagaaggct
tctggttttgaggagtctatgaagtataagaagctgactaatgcccaaagatctgggctc
aatcaaataccgaaccgaaggttcaccctttggtggtcacccactataaacagagcaaat
gtgtatgtgggtttccaagtgcaactggatctcactggaattttcatgcatgggaagata
ccaactttgaagatatctctgattcagatcttccgtgctcacttgtggcaaaaaatacac
gaaagtgtggtgatggatctttgccaggttttggatcaggagcttgatgctctggaaatt
gagactgttcagaaggaaaccattcaccctagaaagagttacaaaatgaacagctcatgt
gccgacattctactttttgctgcccatagatggcccatgtcaaagcccagtcttgtggca
gagtcgaaagatgtgtttgaccagaaagctagtaataagtattggattgatgtgcagctt
cgttggggtgattatgactcccatgatattgagcggtataccagggccaagtttatggat
tacacaacagataatatgtccatatatccatctccaactggggttatgattggaattgat
cttgcatataatttgcattcagcctttggaaattggttccctgggtcaaagccattactt
gctcaggctatgaataagatcatgaagtcaaatccggcattgtatgttttaagagagcga
ataaggaaagggctgcaattgtattcttctgaacctacagagccgtatttatcatctcag
aactacggggagatattcagcaatcagataatttggtttgttgatgacacaaatgtgtat
cgagtcacaatacacaagacttttgagggaaacttgacaactaaaccaatcaatggcgct
atttttatattcaacccaaggactggtcagcttttcctgaaggtgattcacactagtgtg
tgggctgggcaaaaacgtcttggtcagctggccaagtggaaaactgctgaagaagttgct
gctcttgtccgatcattgcctgtggaagaacaaccaaagcagatcattgtgacacggaag
ggaatgttggatccccttgaggttcacttgcttgatttcccaaatattgtgataaaaggg
agtgagctgcagttgcctttccaagcttgtttgaagatcgagaaattcggtgatctaata
ctgaaggccacggaacctcaaatggtcctcttcaacatatatgatgattggttaaagagt
atctcatcctacactgccttctccaggcttatattgattttgcgagcgcttcatgtaaac
aatgagaaggcaaaaatgttgctgaaacctgacaagactgttgtcactgagccccatcat
atctggccctctttatcagacgaacaatggatgaaggttgaagttgccctcagagatctg
attctttctgattatgccaagaagaataatgtgaacacatctgcgcttacacaatctgag
atccgtgatattattctgggagctgagattactccgccttcacaacagcgacaacaaatt
gctgagattgagaaacaggccaaggaggctagccagctcacagctgtcaccacaagaacc
acaaatgtgcacggagaggaattaattgttaccaccacaagtccttacgaacaggctgca
tttggatctaagaccgactggcgagtgagagctatctcggcgaccaatctatatctcagg
gtgaatcatatatatgtgaactcagaagacattaaggaaacggggtatacttacatcatg
cctaagaatattttgaagaagttcatatgcatagccgacctgcgcacacaaattgctgga
tacatttacggtgtaagtcctccggacaatccccaagtgaaggagatccgatgtattgct
atgccaccgcaatggggtactcaccagcaggtgcatctcccatcagcacttcccgagcac
gaattcctgaacgacttggagcctttaggatggatgcacacacagccaaacgagcttcct
cagctgtctcctcaggatcttgctgcccatgcccgagtcttgtccaacaacaaacaatgg
gatggagagaaatgcataattctgacttgcagtttcactcctggttcatgctctttgact
gcctacaagttgaccccatcaggatacgaatgggggaagagcaataccgacgctgccaac
aatccccacggctacctgccaacgtactacgaaaaagtccaaatgctcttgagcgaccgg
ttccttggtttctacatgacacccgataacggtccttggaattacaatttcatgggagtg
aagcacactgtaggtatgaaattcggcatgaagcttggcacgccccgtgaatactaccac
gaggatcatcggcccactcatttcttggaattcagcaacttggaggaaggcgaaacagct
gagggtgacagggaagacaccttcacgtaa
DBGET
integrated database retrieval system
