Andrographis paniculata: 127242952
Help
Entry
127242952 CDS
T08689
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
apan
Andrographis paniculata
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apan03009
]
127242952
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127242952
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
90S particles
Helicases
127242952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DHX37_C
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
127242952
NCBI-ProteinID:
XP_051118687
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MKWEKMKSGEGDLIVLPPKKKKKAKEGGNQVGTRNKPKLSKSQKRKLKMIEEEKEKEKLL
TKSVEVLEKYKIEDDVYSLMWSSRNLGQVETHREKRRREVEFSKAGLATDHIAKKKKNNK
NNGSLEVELDEDSFQSPMINSDTLGDKQISDSRLGTFDGGNVFPAKDDADADDTFGASVS
EVQQGTSHSCLSQETADGDPRQNHYPENNLPSCSSTRDLIAPTVVHVSRPKDVEKQRVDL
PIVMMEQEIMEAINENISVIICGETGCGKTTQVPQFLYEAGFGSNHLKPRGGIIGVTQPR
RVAVLATAKRVAFELGLQLGREVGFQVRHDRRVGESCSIKFMTDGILLREVQSDFLLRRY
SVIILDEAHERSVNTDILIGMLSRVIQERQREFLVQQKRILAGESIEDDDIIYPLKLILM
SATLRVEDFVSNRRIFRDPPPVIEVPTRQYPVTIHFSKKTEIIDYVGQAFKKVISIHKRL
PPGGILVFVTGQREVEYLCRKLRGASREITARPLKGNSEACSSCEEKTPKEINTKEITEA
FEPEGNSGHDITERFSSYMEEDGKDFSEDESDMGYDSTDESDLEYFSDDEKQSKPVESDD
KISDILGSEGNLASLRAAFEALSEKNDSSPCIEVQASNQTTEGPVQTCFVDKQEDKRSSA
GPMHVLPLYAMLPASAQLRVFEKVKDGERLVVVATNVAETSLTIPGIKYVVDTGREKVKN
YNSSNGMETYEIQWISKASAAQRAGRAGRTGPGHCYRLYSSAAFTNLFPDFSSAEISKVP
VDGVVLLMKSMHIGKVANFPFPTPPETNSLIEAERCLKVLEALDEKGRLTHLGKAMAHYP
MSPRHSRMLLTVILIMGNVKEYARANLVLAYAVAAAAALSLSNPFLMDSEGSHNGGDDLN
EGEGARSENSENKEKSRKKKLKQAAKFSREKFSNPTSDALTIAFALQCFELCGNQIGFCS
ENSLHYKTMEEMSKLRKQLLQLVFNSSGGNLLQQDFTWSHGSIEDVESAWRVPSSKQLLR
LNEEEILGQAICAGWADRVAKRIKGGASSASEDGVRKLSSVRYQASMVDETVYIHRRSSV
AKSPPEFLVYKELLHTKRPYIHGATVVKSDWLIRYARALCSFSAPLSDPKPYYDAMADQV
FSWVAPTFGNHLWKLPLHRLPMKDDSNRAAVFAYSLLDGQVLPCLKAARKHMAVSPASVL
KPEALGLKRVHNLLSKLNTAKGRIDSCEKLRMLWKENPAELFPEIQDWFQQGFHVHFKEL
WMKMLHEASLDAKERFPKRKAATYKH
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggagaaaatgaagagcggtgaaggagacctcattgtactgcctcccaagaaa
aagaagaaggcgaaggaagggggaaatcaggttggtacaaggaacaagcctaaattgagc
aaatcacagaaaaggaagctgaagatgattgaggaggaaaaggaaaaagagaagcttcta
acaaagagcgtagaggtgttagagaagtacaagattgaagatgatgtttattcactaatg
tggtcctcaaggaacttgggccaggttgaaactcatcgtgagaaacggagaagagaagtc
gagttttctaaagctggtttggccacagaccatattgccaaaaagaagaagaataataag
aacaatggaagtcttgaagttgagctagatgaggacagcttccagtcaccaatgataaat
tctgatacattaggtgataagcagatttctgatagtcgacttggtacttttgacgggggc
aatgtttttccagccaaggatgatgctgatgctgatgatacatttggagcatcagtttca
gaagtgcaacaagggactagtcattcatgtttgtctcaggagacagcggatggagatcca
cgacaaaatcattaccctgaaaataatctgcctagttgttcttccacaagggatcttatt
gctccaacagtggtgcatgtgtcgaggccaaaggatgtggaaaagcaaagggtggatctg
ccgatagttatgatggaacaagagataatggaagctataaatgagaatatcagtgtcatt
atatgtggtgaaaccggttgtggtaagacaacccaagttcctcagtttctttatgaggct
ggttttggctcaaaccacttgaaacctcgaggtggcattattggtgtcacccaacctcga
cgggtggctgtactggcaactgctaagcgtgtggcctttgaacttggacttcagctgggt
agggaagtcggctttcaggttaggcacgacagaagagtgggagagagctgctcaatcaag
tttatgactgatggaatcttgcttcgagaagtgcagagtgattttcttttaagacgctac
tctgttataattttggatgaagcacatgagaggagtgtgaatacagatatactcattggg
atgctttctcgagttatccaagagcggcagagggaatttctggtgcagcagaaaaggata
ctggctggggaatcgattgaagatgatgacataatataccctctaaaacttattctgatg
agcgctacactgcgagtagaggattttgtgtctaatagaagaatttttcgtgatcctcca
cctgtaatagaagttccaactcggcaatatccagttaccatacatttctcaaagaaaaca
gagatcattgactatgtcgggcaagcattcaagaaggtcatatcaatccacaaaagattg
ccacctgggggcattcttgtttttgttacagggcagagagaagttgaatatctctgccgg
aagctgcgtggagcttcccgagagataactgcacgtccattaaaaggaaacagtgaggca
tgttcttcctgtgaagaaaagactccaaaagaaattaatacaaaagagattactgaggca
tttgagcctgaagggaactctggtcatgatattactgaaagattcagttcttacatggag
gaagatggtaaagatttctcagaagatgaatctgatatggggtatgattcgacggatgaa
agtgatttggagtacttcagcgatgatgagaagcaatcaaaacctgtggaatctgatgat
aagatttcagatattttgggatcagagggaaatcttgcttcattgagggctgctttcgaa
gcattatccgaaaaaaatgattcaagtccgtgtatcgaggtccaagccagtaatcaaaca
actgaaggtccagttcagacctgttttgttgacaaacaagaagacaagcgttcttcagct
ggtccaatgcatgtcctgcctctatatgccatgcttcctgcatcagcgcagcttcgtgtg
tttgagaaagttaaggatggagaacgtttggtggttgttgcaactaatgtagctgaaact
tcgttgacaattccaggaattaagtatgttgtcgacaccggaagagaaaaggtcaagaat
tacaactcttccaatggcatggaaacgtatgagatacagtggataagtaaggcttcagct
gctcagcgagcagggagagccggaagaactgggccgggacattgttatcgcctgtattct
tctgcagccttcaccaacttattccctgatttctcgagtgccgaaatatccaaagtgcct
gtggatggtgttgtcctacttatgaaatcaatgcatattggcaaggttgccaattttccc
ttccctacacctccagagaccaattctttgattgaagcagaacgttgtctgaaggttctt
gaagcacttgatgaaaaagggaggttgacgcatctaggaaaagctatggctcattatcca
atgagccctcggcactccagaatgcttcttacagttattctaattatgggaaatgtgaaa
gaatatgcccgagcaaacctagttctggcctatgcagtcgcggcagctgcagctttgagc
ttgtcaaatccctttctaatggattcagaaggaagtcacaatggtggagatgatttaaac
gaaggcgagggagctagatctgaaaactcagagaacaaagaaaaatcaagaaaaaagaaa
ctgaaacaagctgccaaattttctcgcgaaaagttttccaaccccaccagtgatgctcta
acaattgccttcgctcttcagtgctttgaactttgtggaaaccagatcggattttgcagc
gaaaattctttacactataagactatggaagaaatgtctaagctgagaaagcagcttctt
cagctagttttcaactcaagtggcgggaatctactacagcaggacttcacatggagtcac
gggtccattgaggatgtagaaagcgcctggagggttccatctagtaaacaacttcttcgg
ctcaatgaggaagagattctggggcaggctatctgcgccggctgggctgatcgggtcgct
aagcgcatcaaaggaggagcttcaagtgcctcggaggatggcgtaagaaagttgagctca
gtgcgctaccaggcttccatggttgatgaaactgtatacatccatcgccggtcatcagtt
gctaagtcgccgccagaattcttggtctacaaggaattattgcatactaaaagaccatat
attcatggcgcgacagtggtgaaatcggattggcttattcgatatgctcgggcactgtgt
agtttctcagctcctctttcggatccaaaaccttattacgatgctatggctgatcaagtc
ttctcatgggtggcgccgacttttggtaaccatctctggaagcttcctctgcaccgtctg
ccgatgaaagacgactctaacagggcagcagtgtttgcttattcattgctggatggacaa
gttctaccatgcctgaaagctgcccggaaacatatggcggtttcgcctgcaagcgtgttg
aagccggaggcattgggtcttaaacgagtgcacaatctattgagtaaattaaataccgcg
aaggggagaatagatagctgtgagaagctgagaatgttgtggaaagaaaatccggcagag
ctgtttccggaaattcaagactggtttcagcaaggctttcatgttcattttaaagaacta
tggatgaagatgcttcatgaggcttcgttggatgccaaagaaaggttccctaaacgcaaa
gcagcaacgtataagcactag
DBGET
integrated database retrieval system
