KEGG   Andrographis paniculata: 127243209
Entry
127243209         CDS       T08689                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
apan  Andrographis paniculata
Pathway
apan03030  DNA replication
apan03410  Base excision repair
apan03420  Nucleotide excision repair
apan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:apan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127243209
   03410 Base excision repair
    127243209
   03420 Nucleotide excision repair
    127243209
   03430 Mismatch repair
    127243209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apan03032]
    127243209
   03036 Chromosome and associated proteins [BR:apan03036]
    127243209
   03400 DNA repair and recombination proteins [BR:apan03400]
    127243209
DNA replication proteins [BR:apan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    127243209
  DNA Replication Termination Factors
   ELG1-RFC complex
    127243209
Chromosome and associated proteins [BR:apan03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    127243209
DNA repair and recombination proteins [BR:apan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     127243209
  Check point factors
   HRAD17(Rad24)-RFC complex
    127243209
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 AAA_22 Mg_chelatase Rad17 AAA_16 Viral_helicase1 RCF1-5-like_lid RuvB_N AAA_5 AAA_24 AAA_11 nSTAND3 AAA_19 DNAX_ATPase_lid AAA_28 AAA_assoc_2 AAA_25 MeaB ABC_tran bpMoxR AAA_18 AAA_30 IstB_IS21 AAA_3 AAA_7 NTPase_1 DO-GTPase1 RNA_helicase KTI12
Other DBs
NCBI-GeneID: 127243209
NCBI-ProteinID: XP_051119064
LinkDB
Position
Unknown
AA seq 334 aa
MASSSSSISAAAGPDIPWVEKYRPTKVADIVGNEDAVSRLQVIARDGNMPNLILAGPPGT
GKTTSILALAHELLGPNYREAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIIL
DEADSMTSGAQQALRRTMEIYSNSTRFGLACNTSSKIIEPIQSRCALVRFTRLSDQEILG
RLMNVVAAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFGFVNQENVFKVCDQPHP
LHVKNMVRQVIEGKFDDACTGLKQLYDMGYSPTDIITTLFRILKNYDAPEYLKLEFMKET
GYAHMRICDGVGSYLQLCGLLAKLALARETAKGA
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggcttcctcatcttcttctatctctgcggcagcgggtcctgatattccttgggttgag
aagtatcgccctactaaagtggctgacatagtcgggaatgaagatgctgtctccaggctc
caagtcattgcccgcgacggaaacatgcccaacctcattttagccggacctcctggaact
ggcaagaccactagcatattagctcttgctcatgaacttttaggtcccaattatagggag
gctgttttggagctgaatgcatcagatgacagaggtattgatgttgtgcgcaacaaaata
aagatgtttgcacagaagaaggttacgttgcctccgggaaggcataagataataattttg
gatgaagcggatagcatgacatccggagctcaacaagctttgaggaggaccatggaaata
tattcaaactccacacgttttggacttgcttgcaacacgtcctcaaagatcattgagcct
atccagagtagatgtgcccttgttcgtttcaccagattatctgaccaagagattctcggt
cgtcttatgaatgtggttgcagcagagaaggttccctatgttcccgaaggtcttgaagcc
attattttcacagccgatggggatatgagacaagctctgaacaacttgcaagccacaaac
agtggctttggatttgtaaatcaagaaaatgtgttcaaggtgtgtgatcagccccatcca
ttgcacgtgaagaacatggtgcgccaagttattgaagggaaatttgacgatgcctgcacc
ggattgaagcagctctacgatatgggctattcacccaccgatataatcaccacacttttc
cgaatcctcaagaattacgatgcgccagagtacttgaagcttgaattcatgaaggagacg
ggctacgcccacatgaggatctgtgatggagttggctcgtatcttcaactgtgtggttta
ctagcgaagctcgcactcgcccgagaaacagccaaaggagcttag

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