Andrographis paniculata: 127243259
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Entry
127243259 CDS
T08689
Name
(RefSeq) uncharacterized protein LOC127243259
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
apan
Andrographis paniculata
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apan03009
]
127243259
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127243259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT_GCN1
HEAT_EF3_N
TPR_Trm732_C
RYDR_ITPR
DnaB_bind
Motif
Other DBs
NCBI-GeneID:
127243259
NCBI-ProteinID:
XP_051119137
LinkDB
All DBs
Position
Unknown
AA seq
2684 aa
AA seq
DB search
MATPSAAMAVKSLNKCGGKRFVFKTFSQRVEEINIDVYRSLEPLKAEPSEGSSFFLDALV
EYRELNTAEDFISFYEETLPLVQTLPQIILQKNLIISNLISRLKIEGRLSLEPITRLIAA
LSRDLQNDFIPYLPKISNSLESLLKCGADSDPEIIEQIFTSWSYIMMYLQKYLVKDVGFI
LRVTEKLRYYPKDYIREFMAESISFLLRKTPIPQLKKGITNLMTEVVDEPSDTRTSGVSA
LLSYVMRITPSRLHSRKETLMTILVDDTIFEIGDQNIEGSNAVLEVLVMTFQRLDADLDS
TELTFLWKYLCEKVTDSVTNQNILHLSHLLTLLISMVQSDNHVKILDYEPLVELTGLLLR
TSLIPYLTIKIADPQLQVIEKVLKLMLCIIDGLRKSKNVADLRRVSSEWWKVFDLRSQCL
LDFIEDLLKDPSVVHFFGKHITRSFNNLIDMFPEEVLRLMINFCGKLENENSSFLDWNNK
ETSSRIYHFTEQSLHHWTSKITEAVRGNFILSPLQQNELAVLWAVVRCYSHFGDSQSNPS
LLMDLINAIDEFMVVKADFGGISPLTWHTLIGEALRSYHKLAFSGNTTDMDSAMPKLLDL
AQKYKLSPQILSAVASILDSIPEKCPYLPGSEAGKGLGALDVFAENLCHANKEVRLCTLR
ILCFYEPHWKSEIDAGCDTKLDASEISHVNGSRDSVLDLLRSIEETTLSIETSRKVILLI
SKIQMNLSARIVANQYIPVVLYGVIGVFHNRFSHLWNPAQGCLTVLIKQYCKIVWNRYIT
YLEHCQSLFLASHDQHTTSRNEYKEDTGLLGCFNSDTFPQFDSTPQATVLSLLIQSLQNV
PAIAESHSQQIIPLFLNFLGYNVDKMTSNVAETAIEHKGKEWKGVLKDWLSLIRLFRNPK
ALHQEKFFKDVLLYRLLDQNDPDVQMKVLECLMNWKDDFLLPYRDNMVNLINGKTLREEL
TRWSLSRNSINPIDLGHRAYVIPVVIRILIPKVRNLKMLGSQKNASVNHRKAVLGFLTEV
DVDELPQFFWLLMKPLLSSSQNYDEISKNFLSLPQNPKGEVHTNDILKHFTSETINALSL
KKKYGFLHVVEDILAVFGESHLNPFLDLLINCVTRILASCTSSITNSKIDGLPSSQNSSS
SAMAVALHDEVEDQVTERTGVKQFKDLRSLCLKIIYQVLSKFEDHNFGDGFWDLFFTSVK
PLIDNFKKEGASSEKPSSLFNCFLAMSKSYKLVPLLCREKNLVPDIFSMLTVPSASESIL
SCVLKFTKNLLKLDSELDDEDTIVKSVLLPNLDVLMHSLHSIFGSDSGVKRSVVKLPGKR
ELTIFSLLSKYVNESSIAESFVDILLPLLTKRHQSFDICIDVLQIIRHVVTVLGSGSNRR
ILNSITPLLISSGLDVRIAICGLLETIAADDSSVYILAQILRELNATSDMEVIGLDYDKI
LAAYDKVNLEFFYSIREEHVLPILAHSVHDMSSGDLILRQSAFRLLLSFIEFSAKILHGS
MDSEQMWSKTSIKQVVNNFILKHMGNAMEKEGPIKKVWIDLLREMVLKLPEVANLDPYKA
LCSDDAEQDFFSNIVHLQKHRRARAITRFKSVVSSGNLTEAIMNKVFVPLLFSMLYDVQD
GKDEHIRSACIDALGAISGCMKWNKYYALLLKCFRDLAQKPEKQKIVLRLLCSILNHFHF
SESNLENEPMVLDGDVPDPYTVEKASLLPSDTTTSGELSVVQTCVVKNLFPKIQKLLNSD
SENVNVTTSLVALKLLKLLPYEIMELHLPTIVHRISNFLKNRLESIRDEARSALAACLKE
LGLEYLQFIVKVLKGTLKRGFELHVLGYTLNFMLSKFLTNLTCGKLDYCLEDLLSVVEND
ILGDVSDEKEVDKIASKMKETRKQKSFETLKLIAQNVTFKTHALKLLSPVTAHLQKQLTP
KVKLKLENMLNHIAAGIECNPSVNRTELFIFTNCLIRDGIEDEGNEQEKASENKPEGGDD
SAQANHGNRLINVDRRFSYLITAFGLGVLQNYMKKLKLDKEDEQLLSLLDPFVSLLGRCL
NSKYESITTTALRCLSPLVKLPLPMLQSQADQIKNSLLVIAQGSIISSPQLMEACIKLLT
VLLQSTKITLSADQLHMLIQFPLFVDLARNPSFVALSLLKAIVHRKLVVPEIYDVVQIVA
ELMVQSQQEPIRKKCSQILLQFLLGYHLSEKRLQQHLDFLLANLRYEHSTGREAVLEMIH
AIILKFPRKIIDAQSQTMFLHLVITLANDGDSKVRSMTAAAIKCLIGHVSPHLLHSILEY
SLSWYVGVKQNLWAAAAQVLGLLVEVMGKKFEKHLTQILPVMRKILQSALSSATSTEQNS
SEETAPLWKEAYYSLVMLEKILNQFHNLFFDRDLADIWEALCEFLLHPHTWLRNISNRIL
SYYFTAVTNNCRQNNATSMEAFILMRPGILFLVAVSLCCQLKVQLNDDAAGSVILQNLVF
AVCSLQSLLGKDECMDIPKYWSSLEQREKEYFLKAFGALDPKKGRRTLVTFTSDFVSRHN
GHHQHPFISYFLQRMGKLSFQMEVPQMKIVFSCFKSVAPKLLGSYETAPPVDSEDLYSYA
YQLLQPLYRVCEGYTGAVVSDDLKQLGNEVCESIRDIMGVQKFVQIYSQIRKNLKEKRDK
RRRDEKVMAVVNPVRNAKRKLRVAAKHKANKKRKMMTMKMGRWM
NT seq
8055 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccttcagcggctatggcggtgaaatctcttaataaatgcggcggaaagcgt
tttgtttttaagacgttttcgcaaagagtggaagaaattaatatagatgtttatcgaagt
ctggagccattgaaggcagagccctcggaaggctcttctttttttcttgatgctcttgta
gaatatagagagctgaacacagctgaggattttatatcattttatgaggaaaccttacct
ttggtacagacactgccacaaattatcttgcaaaagaatttaataatttcaaacctcatt
tctagattgaaaatagaaggaagattgtcactcgaacctattacgaggttaattgccgct
ttgtcaagagatctacaaaacgacttcataccctatcttcccaaaatttccaattctttg
gaatctcttcttaaatgtggtgctgacagtgaccctgaaataattgagcagatattcaca
tcatggtcatatattatgatgtacttgcagaagtacctggtgaaggatgttggttttatt
ttaagagttaccgaaaaacttagatactatccgaaagattatattcgagagtttatggca
gaatcaatatcatttttgctaaggaaaacaccaatcccacagctaaagaaaggtattaca
aatctcatgactgaagttgtggatgaaccatcagatacaagaacatctggtgttagcgca
ttgctgtcttatgttatgagaattacaccatctaggttgcactcaagaaaagaaacacta
atgacaatactggtggatgacaccatcttcgaaattggtgatcagaatattgaaggatca
aatgctgttcttgaagttctggtaatgactttccagagactcgacgcagatctcgattcc
acagaattgacattcttgtggaaatacttgtgtgaaaaagtaacagattccgtgaccaac
cagaatattttgcacctgagtcaccttttgaccctgcttatttctatggtgcaaagtgat
aatcatgtaaaaattcttgattatgaacccctggttgagctaactggtctactcttgcgg
acttctcttattccgtaccttaccatcaagattgcagacccacaactgcaggtcattgaa
aaagtccttaagctaatgctatgcattattgatggtctcagaaagtccaagaatgtggca
gatttgaggcgtgtctcttcagaatggtggaaagtgtttgatttgaggagccaatgttta
ctggattttattgaagatctactgaaggaccccagtgttgttcatttctttggaaaacac
attacacgttcattcaacaatttgatagacatgttccctgaggaagttttgcgtttaatg
atcaatttctgtgggaaactggaaaacgaaaactctagcttcttagattggaataacaag
gaaacatcctcaagaatttaccatttcactgaacaaagtcttcatcactggactagtaag
attacagaagctgtaagagggaattttattctctctccgttacaacaaaatgaactggct
gtcctgtgggctgttgttcggtgctattctcattttggagattcccaatcaaatccatct
ttactgatggacctgataaatgcaattgatgagtttatggttgtgaaagctgattttgga
ggcatttctccactcacttggcatactttgattggtgaggctttgcgttcttaccataag
ttagctttcagtggaaatactactgatatggattctgcaatgccaaaattattggatctt
gcccagaaatacaagttatcaccgcaaatattatcagcagtagccagtattttggattcg
atccctgaaaaatgcccttaccttccaggcagtgaagctggaaaggggttaggtgctttg
gatgtatttgcggaaaatctatgtcatgccaacaaagaagtccgcctttgcaccttgcgc
atattatgcttttatgaaccacattggaagagtgagatcgatgctggatgtgatactaaa
ttagatgcttctgagattagtcatgtaaatggatcccgtgacagtgttcttgaccttctc
agatcaattgaagagaccaccctttctattgagacaagccgtaaagtcattctactgatt
tctaaaatacagatgaacctgagtgctcgcattgttgctaatcagtacattcctgttgta
ttatatggagttattggtgtattccataaccgatttagccacttatggaatcctgcccaa
gggtgcctcacggtcctcatcaaacaatattgcaagatcgtttggaacagatatataaca
tatcttgaacactgtcaatcactttttctggcatctcatgatcaacatacaacaagcaga
aatgagtataaggaggacactggtttactgggatgtttcaattctgataccttccctcaa
ttcgatagtactcctcaggcaacagttttgtccctcttgattcagtcattacagaatgtt
ccagcaattgcagaatctcactctcagcaaataatacccctgtttctcaatttcttgggc
tacaatgttgataagatgacaagtaatgttgccgaaacagcaattgagcataaagggaaa
gaatggaagggggttctcaaagactggttaagcttaatccgattgtttcgcaatccgaaa
gctttacatcaagaaaagtttttcaaggatgttctgctgtataggcttcttgaccagaat
gaccctgatgtacaaatgaaagttctagagtgccttatgaattggaaagatgatttcttg
cttccgtaccgggataatatggtaaatttgatcaatggtaaaactttaagggaggagctt
actaggtggagcttatcaagaaattctattaatccgattgatcttggacatagagcttat
gttataccagttgtgatacggatactaataccgaaagttagaaacttgaaaatgcttggt
agccagaagaatgcaagcgttaatcatcgtaaggccgttcttggattcttaactgaggtt
gatgttgatgagcttcctcaattcttctggttgttgatgaagcccctactttctagctct
caaaattatgatgaaataagtaaaaatttcttgagtttaccccaaaatccgaagggtgaa
gttcatacgaatgacatccttaaacattttacatctgagaccataaacgccctatctttg
aaaaagaaatatggttttcttcatgttgttgaagatattttggcagtttttggcgaatct
cacctcaatccttttcttgatctactaatcaactgtgtcacacggatcttagcaagctgc
acttcatctattacgaattccaagattgatggattgccttcttcacagaactcttctagt
tctgctatggctgttgctctccatgatgaagtggaggaccaagtcacggagagaacgggt
gtgaagcaatttaaagacttgagatctttgtgtctgaagatcatatatcaagttcttagt
aaatttgaggatcacaactttggtgatggattttgggacctcttctttacatcagtgaaa
cccttaatagacaatttcaaaaaggagggtgctagtagtgagaagccaagttctctgttt
aattgctttcttgctatgagtaaaagctacaagcttgtgccactattatgcagggagaag
aatcttgtgcctgatattttctccatgctaactgttccctcagcttcagagtcaatttta
tcatgtgttttgaagttcactaagaacttattgaagcttgatagtgaattggatgatgaa
gataccattgtaaaaagtgtactgcttcctaatcttgatgtacttatgcacagcttgcat
agtatttttggcagtgacagtggtgttaagaggtcggttgtgaagctccctggaaaaagg
gaactcacaattttcagcttgctatcaaagtatgttaacgagtcttcaatagctgaaagt
tttgttgacatacttctcccccttctcacaaagagacatcagagtttcgatatctgtatt
gatgtgctacaaatcatccgtcatgtggtaacggtgctgggaagtggaagtaatagaaga
attttgaattcaatcactcctcttcttatctcatctgggttggatgtccgcattgctata
tgtggtcttcttgagacaatcgcagcagatgattcctctgtatacatactggcgcaaatt
cttcgtgagctaaatgcaacgtcagatatggaggtcattggcttggactatgacaaaata
ctagcagcttatgacaaagttaacttggaattcttttactctattcgggaagagcacgtg
ttgccaatcttggctcattctgtacatgacatgtcttctggtgatttgatcttgaggcaa
agtgcattcaggttgttgctctccttcattgagttctctgctaagatacttcatggatcc
atggactccgaacagatgtggtctaagacaagcattaagcaagtggtgaataattttatc
ttgaaacatatgggaaatgcaatggaaaaagaaggtcctataaagaaggtatggattgac
ttgcttcgggaaatggtgctgaaacttccagaggttgcaaacctcgatccatacaaagct
ttgtgcagtgatgatgcagaacaagactttttcagtaacatagttcacttacagaaacat
aggagagcaagggcaattactcgctttaaaagtgttgtcagctcagggaatctcacggag
gccatcatgaataaggtgtttgtcccactgctgtttagcatgttgtatgatgtgcaagat
ggaaaggatgaacatataagaagtgcatgtattgatgcccttggcgcaatatctggttgt
atgaagtggaataaatactatgcattacttctcaagtgcttccgtgatttagctcaaaaa
ccagagaagcaaaaaattgtgctgcggcttttatgctctatcctcaatcatttccatttt
tcagaatcgaatttggaaaatgaacccatggttttggatggtgatgttcctgatccctac
actgttgaaaaggcttcattactgccaagcgatactaccacttctggtgaactctctgtt
gtccagacttgtgtagtaaagaatttattccccaagattcagaaactgttgaattcggat
tctgagaatgtcaatgttactaccagcctggttgcgcttaagcttctgaaattgcttccg
tatgagatcatggagttgcatcttccaacaattgttcaccgtatttccaactttctcaag
aatcgtttggagagtatccgggatgaagctagatctgcattggctgcttgcttaaaggaa
cttggcctagagtatctgcaatttattgtcaaagttctgaagggcacactgaagaggggt
tttgaattgcacgtgcttggatacacgctcaatttcatgttgtcaaagtttcttacgaat
ttgacatgtggtaagttggattactgcttagaagaccttctttctgtagtggaaaatgat
atacttggcgatgtctcggatgaaaaagaagtggacaagattgcttcgaaaatgaaagag
acaaggaagcagaagtcatttgaaactctcaaattgattgcgcagaatgtcaccttcaag
actcatgctttgaaactgctttcgcctgtcacggcgcatctgcaaaagcagcttacacca
aaggtgaagttgaaattggagaacatgctgaatcacattgctgctggtattgaatgcaat
ccgtctgttaaccggactgagctgtttatattcaccaattgccttattagagacggtatt
gaagatgaaggcaacgagcaagaaaaagcctcagaaaataaaccagaaggaggtgatgac
agtgctcaagcaaatcatggtaacagattgataaatgttgatcggcgtttttcttattta
attactgcatttggtctcggagtcctgcagaattacatgaaaaaattgaagcttgacaaa
gaagacgagcaactattatcattactagacccttttgtgagtttattgggtcggtgtttg
aattccaagtatgaaagtatcacaacgacagcacttaggtgcttgtcaccgctcgtgaag
ttgccattgccaatgcttcagtcccaagccgatcaaatcaagaattcattgctagtaatt
gctcaaggctcgataatctcaagccctcaacttatggaggcgtgtataaagctgttgacg
gtgcttctgcaaagcactaaaattacactttcggctgatcaactgcatatgctgatccag
tttcctttatttgtcgatttggctagaaatccttcgtttgttgcactctcacttttgaaa
gctattgtgcaccgaaagctggtggttcccgagatatatgatgttgtccagattgttgcg
gaactgatggtacaaagtcaacaagaaccaattcggaaaaagtgtagtcaaatcttactt
cagtttttgcttggctatcatctttcggagaagcgactacagcaacacctagatttcctg
ctcgctaatctcagatacgaacattccaccggaagagaagccgtcctcgaaatgattcat
gcaattatcctgaaatttccacgaaaaattatagatgctcaatctcaaacaatgtttttg
catttggtcatcactttggcgaatgatggtgacagcaaagttcgttccatgactgcagct
gcaataaagtgcctcatcgggcatgtgagcccgcatttattacattcaattcttgaatac
agtctttcttggtacgtcggtgtaaaacagaatttgtgggctgctgcagcacaggtttta
ggtttgctcgtggaagttatggggaaaaaattcgagaagcacctaactcaaatacttccg
gtaatgagaaagattttgcaatctgctctaagttctgccacatccactgaacaaaactca
tcggaagaaacagctcctctatggaaagaggcatattattcattggttatgttggagaag
atcctaaatcagtttcacaacctgttctttgatcgagatcttgcggatatatgggaagct
ctatgcgaattcctattacatcctcacacgtggctgcgcaacatatcaaatcgaattctg
tcatattacttcactgccgtaaccaataactgcagacagaacaacgcaacttccatggaa
gccttcattttgatgagaccgggcatccttttcctcgtagctgtttctttatgttgtcag
ctgaaggtacaattgaatgatgacgcagccggcagcgttattcttcagaatctcgtcttt
gcagtttgcagtctccagtcccttttaggaaaggacgagtgcatggacattcccaaatac
tggtcgagccttgaacaacgcgagaaagagtacttccttaaagctttcggcgcgctcgat
cctaaaaagggaaggaggacacttgtcacttttacttccgactttgttagtcggcataat
ggacatcatcaacatccatttatttcatacttccttcagaggatgggaaagttatccttc
caaatggaggtccctcagatgaaaatagtcttcagctgtttcaaatcagttgcgccgaag
ctgctcggaagctatgaaacagctccaccagtcgacagcgaagatctctacagttacgcg
tatcaattgttgcagcctctgtaccgtgtctgtgaaggctacaccggggcagttgtttca
gatgatctgaagcagttgggaaatgaggtttgtgaaagcataagagacataatgggagtg
cagaagtttgtacaaatctacagccaaataaggaagaatcttaaagagaagcgcgacaaa
aggagacgagacgagaaagtgatggctgtcgtgaatccggtaagaaatgcgaagcggaag
cttagagttgcagctaagcataaggctaataagaaaaggaagatgatgacaatgaagatg
gggagatggatgtga
DBGET
integrated database retrieval system
