Andrographis paniculata: 127243309
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Entry
127243309 CDS
T08689
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
apan
Andrographis paniculata
Pathway
apan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127243309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127243309
03012 Translation factors [BR:
apan03012
]
127243309
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127243309
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127243309
Translation factors [BR:
apan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127243309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
dsrm
AAA_22
AAA_19
T2SSE
AAA_16
nSTAND3
ATPase
Dicer_dimer
PhoH
Motif
Other DBs
NCBI-GeneID:
127243309
NCBI-ProteinID:
XP_051119223
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MPFPLALALPLPLPLPFSSMFVHRSLKRFQLGALSPARLTSAPISLSSTHRRLHYLYPKH
RTYRTIAVTCPSLLLSRTRNASSFLLPAFYQRNIGYGRLAYDDYLSSEDSDAEIQSSSKQ
LNASTLDNVEDWRHKLTMLLRCKDEQEFISREKKDRRDFEQLSVLASRMGLHSRQYGKVV
VFSKVPLPNYRSDLDSKRPQREVILPFGLLRLVDSHLRSHLSRKSMGKKEFSHDAFSTLK
ENWSSSLDEGFNEPKMPSGQSVIAERIIRQRSLQMRSKQEDWQESPEGQRMMEFRKSLPS
YKERETFLNAISRNQVVVVSGETGCGKTTQLPQYILESEIEAARGAACNIICTQPRRISA
MAVAERVAAERGEKIGESVGYKVRLEGMKGRDTRLLFCTTGILLRRLLVDRSLRGVTHVI
VDEIHERGMNEDFLLIVLKDLLPRRPELKLILMSATLNSELFSSYFSRAPTLHIPGFTFP
VRTHFLENVLEMTGYRLTTYNQIDNYGQEKMWKMQKQAVRKRKTQIASSVEDALMAADFR
EYSPQVRESLSYWNPDSVGFNLIEHVLSHICHKERPGAVLVFMTGWEDINSLKDQLQAHP
LLGDPNRVLLLACHGSMASSEQKLIFDKPADGIRKIVLATNMAETSITINDVVFVVDCGK
AKETSYDALNNTPCLLPSWISKASARQRKGRAGRVQPGECYHLYPRYVYDAFADYQLPEL
LRTPLQSLCLQIKSLQLGNISDFLSRALQPPEPLSVQNAVEYLKMIGALDEDENLTVLGR
NLSMLPVEPKLGKMLIYGAIFSCLDPVMTIVAGLSVRDPFLMPFDKKDLAESAKAQFSAS
DFSDHLALVRAFDGWKAAEREQSGYEYCWRNFLSTQTLKAIDSLRKQFLYLLKDIGLVDN
NDSCNTWSHDKHLISAVICAGLFPGICSVVNKEKSISLKTMEDGAVLLHSNSVNAQEAKI
LFPWLVFNEKVKVNSVFLRDSTGVSDSMVLLFGGDVSSGGLDGHLKMMGGYLEFFMKPTV
AATYLSLKRELNELVQNKLSNPKLDTHGHHDLLKAVRLLISEDHCEGRFVFGRQIPTSST
KSRKDNQSGSGSLNGGGTNAKSHLQTLLCRAGHESPSYKTKQVKNNKFISTVMFNGLDFD
GRPCTSKKEAEKDAAAEAVRWLTGESHSSERTVEYMASVLGKSRRKRKSCVARWR
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccccttggccttggccttgcccttgcccttgcccttgcccttctcttccatg
tttgtccaccgctctctcaaacgtttccagctcggagcactgtctccagcacgcctcacc
tccgcaccaatatcattgtcttccacgcaccgccgcctccattacctgtatccaaaacat
cgtacctacaggaccatcgctgtcacttgtccttctcttctcctgagccgcacccgaaat
gcttcttcttttctcttgccggctttttaccagcggaatatcgggtacggtaggttggct
tacgatgattacttatcgtccgaggattctgatgccgaaattcagtcttcttccaaacaa
ttgaatgcctcaacacttgataatgttgaagactggaggcataagttgaccatgctattg
cgatgcaaagatgagcaagagttcatatcaagagagaaaaaggacagacgtgattttgag
caactttcagtacttgcaagcagaatgggattgcatagccgccagtatggaaaagtagta
gtgtttagtaaagttcctcttccaaattatcgatcagatttggatagcaagcgtcctcag
cgagaggtgatattgccatttgggttgctgaggctggtagattctcatctcaggagtcat
ctatcgagaaaatctatgggcaagaaagagttttcacatgatgccttttcaacattaaaa
gagaattggagttcatcacttgatgaaggatttaatgagccgaagatgccttcaggccaa
agtgttatagctgagagaattattaggcagagaagcttgcaaatgcgcagcaaacaagaa
gattggcaagagtctccagaaggacagaggatgatggaatttcgtaagagtcttccatca
tataaggagagagagacttttttgaatgccatatctcgaaatcaggtagttgttgtctct
ggtgaaactggctgtggaaaaactacacaactgccacagtatatcttggaatcggaaatt
gaagcagccagaggagcagcctgtaatattatatgtacccagccaagaagaatatctgct
atggcagttgctgagagagtagctgcagagcgtggtgagaaaataggagaatctgttggt
tataaagttcgccttgagggaatgaaaggacgagatactcgcctccttttctgtaccact
gggatacttttaaggaggttgttagttgacagaagtttgagaggtgtgacccatgttatt
gttgatgagattcatgagcgtggaatgaacgaagactttctgttgattgtgctgaaggat
cttcttcctcgtcgaccagaattaaaattaatcttgatgagtgcaactctaaactctgag
ctcttctcttcctactttagtagggctccaactctccacattcctggttttacatttcct
gtgcggactcattttctggaaaatgttctagaaatgacaggctataggctaacaacatat
aatcaaattgataactatggccaagaaaagatgtggaaaatgcagaagcaggctgtaagg
aaacggaagactcaaatagcatcttctgttgaggatgctctcatggctgctgattttaga
gagtatagtcctcaagttcgggaatcattatcttactggaatcctgattcagttggcttt
aacctaattgagcatgtgttatctcatatttgtcacaaagaaaggcctggtgctgtgcta
gtctttatgacaggttgggaagacataaattctttgaaagatcagcttcaagctcatccc
ctattgggagatccaaacagagtcctgttgcttgcatgccatggttccatggccagttca
gagcagaaactgatttttgataagcccgctgatggaatcaggaagattgttctggcaaca
aatatggctgaaacaagtataaccataaatgatgtggtatttgttgttgattgtggaaaa
gcgaaagagacctcctatgatgctctaaataacactccttgtttacttccttcctggatc
tcaaaggcttctgctcgccaaagaaaaggcagagcaggccgtgttcaacccggtgagtgt
tatcatctctatcctaggtatgtgtatgacgcctttgcagattatcaattgccagaactt
ttgagaacacccttacagtctctttgtttacaaatcaagagtctccaacttggcaacatc
tcagactttctttcaagggccttacaaccacccgaacctctatcagttcaaaatgcagtt
gagtatctaaaaatgattggggctctagatgaagatgaaaatctcactgtgctggggcgc
aacttgtctatgcttccagttgagcctaagcttgggaaaatgcttatatatggtgctatt
ttcagttgcttggatccagtaatgacaatcgttgctggcttaagtgtcagggatccattc
ttgatgccctttgacaagaaggatcttgctgaatctgcaaaagcccagttttctgctagt
gacttcagcgaccatcttgctcttgtccgggcttttgatggttggaaagctgctgaaagg
gaacaatccggttatgagtactgctggagaaattttctttctactcaaacactgaaagcc
attgattccctaaggaagcagttcctttatttgctcaaagacataggtttagttgacaac
aatgacagttgtaacacatggagtcatgacaaacatctcatttctgcagttatatgtgct
ggtcttttccctggaatatgctctgttgtgaacaaggagaaatcaatatcactaaagaca
atggaagatggtgcagtgcttctacattcgaactctgtgaatgcccaggaagccaaaatt
ttgtttccatggcttgtcttcaacgaaaaagtaaaagtcaattcggtgttcctccgtgat
tcaactggtgtatctgattcaatggttcttttatttgggggagatgtctctagtggtgga
ctagacggtcacttgaaaatgatgggtgggtatttggaattcttcatgaagcctacagtg
gctgctacatacctgagtctgaagagagagttaaatgagcttgttcagaataagctttcc
aatcccaagttggacacacatggccatcacgatcttctaaaagcagtaagattattaatc
tcggaggaccattgtgaaggcagatttgtatttgggcgtcagataccaacatcctccaca
aagtccagaaaagataatcaatctggttctggttcattgaacggagggggcactaatgca
aagtcacacctccaaaccttgctttgtagggcaggtcatgagtcaccttcatacaagaca
aaacaagtgaaaaacaacaagttcatatccactgttatgtttaatggactagattttgat
ggcagaccttgcactagtaagaaagaggcagaaaaagatgctgctgctgaggctgtgagg
tggttgactggtgaaagccattcatctgaaagaactgttgagtacatggcttccgtcctg
ggaaaaagtagaaggaaacggaaaagttgtgttgcaaggtggaggtag
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