Andrographis paniculata: 127243357
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Entry
127243357 CDS
T08689
Name
(RefSeq) regulator of nonsense transcripts UPF2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
apan
Andrographis paniculata
Pathway
apan03013
Nucleocytoplasmic transport
apan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127243357
03015 mRNA surveillance pathway
127243357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127243357
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127243357
mRNA cycle factors
P-body specific factors
127243357
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Xpo1
Motif
Other DBs
NCBI-GeneID:
127243357
NCBI-ProteinID:
XP_051119289
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MEHADDGSGEHHDKHEDDAKHDDEEAVARLEEFKKSIEAKMALRQSNLNPERPDSGFLRT
LDSSIRRNTAVIKKLKQINEEQRESLMDELRSVNLSKFVSEAVTAICDAKLKSADIQPAV
QICSLLHQRYKDFAPSLVQGLLKVFVPGKSTEDIDADKNSRAMKKRSTLKLLLEIYFVGV
VEDCGIFTNIIKDLTNSEHLKDRDTTQTNLSLLTSFARQGRYLLGLPLTGQDILEQQFFK
GLNITADQKKFFRKAFQAYYDVVVELLQAEHASLRQMEHENAKILNAKGELSEENASSYE
KLRKSYDLLSRSISSFAEALDMQPPVMPEDGHTTRVTSGEESSSPVASKESSSVEPLWDD
EDTKAFYENLPDLRAFVPAVLLGEADPKSSEQSSKSQESSTDAAPDADKVHISIQENPEV
SADSGIAMEDKDCKDKEEKDKEKGKEKDTERKGESEKDKTKGVDGTHLEALLHRLPSCVN
RDLIDQLTVEFCYLNSKSSRKKLMRALFNVPRTSLELLPHYSRMVATLSTCMKDVSTMLL
QLLEEEFNNLINKKDQMNIETKIRNIRFIGELCKFKIAPASLVFSCLKACLDDFTHHNID
VACNLLETCGRFLYRSPETTVRMSNMLEILMRLKNVKNLDPRQSTLVENAYYLCKPPERS
ARVSKVRAPLHQYIRKLLFSDLDKSSIEQVMRQLRKLPWSECESYLLKCFLKVHKGKYGQ
IHLIASLTAGLSRYHDDFAVAVVDEVLEEIRRGLELNEYGMQQQRIAFMRFLGELYNYEL
IDSSVIFDTLYLILAFGHGTSEQDTLDPPEDCFRIRMVITLLETCGHYFDRGSSKRKLDR
FLIHFQRYILSKGVLPLDIEFDLQDLFVELRPNMTRYSSFEEVSAALIELEELERRVTTE
KIHNEKYSDSEKPPARTSSGAAMANGKNLANGIDENGAVHEEVGETDSDSGSGTFEHSEH
EDEETDGENQDEGESEDDYDDRVDQGSDEDEVHVRQKVAEVDPVEEADFDREFRALMQES
LESRKLELRSRPTINMTIPMNVFEGSNKEHHGRGLEGDSGGETTDDGSGGNKEVRVKVLV
KRGNKQQTKQMYIPRDCSLVQSTKQKEAAELEEKQDIKRLVLEYNDREEEELNGGGMQQP
LNQGGGRVGNRGGNSWEGGQQRSSRHRQIYHSGAGMYYGRRR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgcggacgatggctccggcgagcaccacgacaaacacgaagacgacgccaag
cacgatgatgaagaagctgttgcccgacttgaggaatttaagaaatccattgaagcaaag
atggcactgcgtcagagtaatttgaaccctgagaggcctgattctgggtttcttaggaca
ttggactctagcatcaggcgcaacactgctgtcattaaaaagttaaaacagatcaatgaa
gagcagcgcgaaagtttaatggatgagctgcgcagtgtcaatttaagcaagtttgtcagc
gaagcagtgactgccatctgtgatgcaaagcttaagtctgctgacatacaacccgccgta
cagatttgctctttacttcaccaaaggtacaaagattttgcacccagtctcgttcaaggt
ctcttgaaagtttttgtaccaggaaaatccacggaggatatagatgcagacaagaattca
agggccatgaagaagcgaagtacattgaagcttcttctggaaatttattttgttggagtt
gtagaagattgtggcatcttcacaaatataattaaggatctaactaacagcgaacatctg
aaagatcgtgatacaacccagacgaatctttcgcttcttactagttttgctcgacaagga
agataccttcttggacttccgctaactggacaggatattctggaacagcagttcttcaag
ggccttaatattaccgcagatcagaagaagttctttaggaaggcttttcaagcttattat
gatgttgttgtggaacttcttcaggctgaacatgcttcacttcgccaaatggagcatgag
aatgcgaagatattgaatgctaaaggtgaactgagtgaagaaaatgcctcttcgtatgaa
aaactgcggaaatcctatgaccttcttagtcgcagcatctcttcttttgcggaagcactt
gatatgcaacctcctgtgatgcccgaggatggtcatacaaccagagtaacatcaggggag
gaatcttcatctcctgttgctagcaaagaatcttcttctgttgaacccctgtgggatgat
gaagatactaaagctttctatgaaaaccttccagacctgagagcatttgttcctgctgtg
ctgctgggagaggcagatccaaagtcgagtgagcaatcttcgaaatcacaggaatcatca
actgatgctgcacctgatgcagacaaagttcatatatcaatacaagaaaatcctgaagtt
tctgctgattctgggattgcaatggaggataaggattgcaaagataaagaagaaaaagac
aaggagaaaggaaaagagaaggatactgaaagaaaaggcgaaagtgaaaaggataaaact
aaaggcgttgatggaacacatcttgaagctttgctgcacaggcttccgagttgtgtaaac
cgcgacctgattgaccagttgactgttgagttctgctatttgaactcaaagtccagtcgg
aaaaagctcatgagggctttgtttaatgttccaaggacatcactggagttgctgccacac
tactcgcgcatggttgctacactgtcaacttgcatgaaggatgtttcgacaatgctctta
cagttgttggaggaagagtttaacaatttaattaataaaaaggatcaaatgaatatcgaa
acaaaaatcaggaacatcaggtttattggagaactatgcaagtttaaaattgccccagcc
agcttggtttttagctgtctaaaggcttgcctagatgatttcactcaccataatattgat
gtggcttgtaacctccttgagacatgtggtcgctttctctaccgatctccagagaccact
gtccgcatgtcaaacatgttggaaatattgatgcgcttgaaaaatgtcaaaaatttggat
ccccgtcagagtacattagttgaaaatgcctactatttgtgcaaaccaccagaaagatct
gcacgagtctccaaagttcgggcccctctgcatcagtatatcagaaaactacttttctca
gatctggacaaatcttccatcgagcaagtgatgcgacaattacgtaagctaccttggagt
gaatgtgagtcataccttcttaagtgttttttgaaggtgcataaggggaaatatggtcag
atccatttgatagcgtcacttactgctggattgagtcgctatcatgatgactttgctgtg
gctgttgttgacgaggttctggaggaaattagacgtggtttggaactgaatgaatatgga
atgcagcaacaacggattgcattcatgcgcttcttgggggaactatacaactatgaactt
atagattcatctgttatttttgataccctatatttgattcttgcatttggccacggaacc
tcagagcaagatacattggatccgccagaggactgtttccgaatcagaatggttatcaca
cttctagagacctgtggacactattttgatagaggttcatcaaagaggaagctcgatcgg
tttttgattcatttccaaaggtatatattgagcaaaggtgtccttcctctggatatcgag
ttcgatctgcaggacttattcgtcgagttgaggccgaacatgacccgatattcctcattt
gaggaggttagtgctgctctcattgaactcgaagagctcgagcgcagagtcaccacagag
aagattcacaacgagaagtattccgactctgaaaaacctccggccaggacgagctccggc
gctgcaatggcgaatggcaaaaatcttgccaatggcatcgacgagaacggcgcagtgcac
gaggaagttggggagaccgacagtgactccgggagtgggacctttgagcacagcgagcac
gaagacgaagaaacagacggcgagaaccaagacgagggtgaaagcgaagatgactatgac
gacagagtcgatcagggctctgatgaagatgaggttcacgttcggcagaaggtggccgag
gttgacccggtcgaagaggccgatttcgatagagaattccgcgccctaatgcaggaaagc
ctggaatcgcgaaagctggagctacgctcgcgcccgacaataaacatgacgatacccatg
aacgtgttcgaggggtcgaacaaggagcaccacggaagagggctggaaggcgacagcggg
ggggagacgaccgacgacgggagcggggggaacaaggaagtccgagtgaaggtactggtg
aagcgcggcaacaagcagcagacgaagcagatgtacattcctcgggactgctctctggtg
cagagcacgaagcaaaaagaggcggcggagctggaagagaagcaggacataaagcggctg
gtgttggaatacaacgaccgggaagaggaggagctgaacggaggagggatgcagcagccg
ctgaatcaaggcggaggaagagttgggaatcgcggaggaaatagttgggagggggggcag
cagagatcttcgcggcacagacagatttaccattcgggggccgggatgtactacggaagg
agacgttaa
DBGET
integrated database retrieval system
