Andrographis paniculata: 127243405
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Entry
127243405 CDS
T08689
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
apan
Andrographis paniculata
Pathway
apan03018
RNA degradation
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127243405
09123 Folding, sorting and degradation
03018 RNA degradation
127243405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127243405
03041 Spliceosome [BR:
apan03041
]
127243405
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127243405
mRNA degradation factors
5'-3' decay
Lsm complex
127243405
Spliceosome [BR:
apan03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
127243405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
127243405
NCBI-ProteinID:
XP_051119360
LinkDB
All DBs
Position
Unknown
AA seq
89 aa
AA seq
DB search
MAGADKPSTAKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ
LKNKYGDAFIRGNNVLYISTSKGTLAEGA
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atggccggagctgataagccatccacggcgaaaactcctgctgattttctcaaatctata
cgcggtcgacctgttgtagtcaagctgaattcgggggtcgactatagaggtattctcgcg
tgtctggatggatatatgaatattgcaatggaacaaacagaagaatacgtaaatggtcag
ctgaagaacaagtatggcgacgccttcattcgtggaaataatgttctttatatcagtacg
tcgaagggaaccctggccgagggagcttaa
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