Andrographis paniculata: 127243631
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Entry
127243631 CDS
T08689
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
apan
Andrographis paniculata
Pathway
apan03082
ATP-dependent chromatin remodeling
apan03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127243631
03083 Polycomb repressive complex
127243631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apan03036
]
127243631
Chromosome and associated proteins [BR:
apan03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
127243631
Histone modification proteins
HAT complexes
HATB complex
127243631
HDAC complexes
Sin3A-HDAC complex
127243631
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127243631
PRC2.2
127243631
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
127243631
Heterochromatin formation proteins
Other heterochromatin formation proteins
127243631
Chromatin remodeling factors
NuRD complex
127243631
NuRF complex
127243631
NuRF complex (fruit fly)
127243631
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
eIF2A
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
127243631
NCBI-ProteinID:
XP_051119700
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MENAAERPVEERYAQWKSLIPVLYDWLANHNLVWPSLSCRWGPQVEQATYKNRQRLYLSE
QTDGSVPNTLVIANVEVVKARVAAAEHIAQFNEESRSPFVKKNKTIIHPGEVNRIRELPQ
NSNIVATHTDSPDVLIWDVESQPNRQPVLGAAPSRPDLVLTGHKDNAEFALAMCPTEPSV
LSGGKDRSVVLWSIQDHITSLAADQGAQKSPGSTKGSLVNGKTADGPTVQARGIFLGHED
TVEDVQFNPSSAQEFCSVGDDSCLILWDARTGNSPAIKVEKAHDADLHCVDWNPNDVNLI
LTGSADNTVRMFDRRNLNSGRVGTPIHIFEGHSAAVLCVQWSPEKGTVFGSAAEDGILNI
WDHGKIGKVEDNPGAEDANYPSGLFFRHAGHRDKVVDFHWNSADPWTIVSVSEDGEKTGG
GGTLQIWRMIDLIYRPEDEVIAELETFKSHLLTCSDS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgcggcggaacgtcctgtggaggagcgttatgcacagtggaagtccttgata
cctgtgctgtacgactggcttgcgaatcacaacctcgtttggccctccctctcttgccga
tgggggccacaagtggaacaagcaacttacaagaatcgtcagcgcctttacctctctgaa
cagacagatggcagtgttccaaacacacttgtcatagcaaatgttgaagttgtaaaggct
agagttgctgcagcagagcacatagctcaattcaatgaagagtcacgctcaccttttgtg
aagaagaacaagacaatcatacatcctggcgaggtgaatagaattagggaactgccacag
aatagcaacattgtggccactcacactgacagccctgatgttctcatttgggatgttgaa
agtcaacctaatcggcaacctgttttaggtgctgcaccatctcgtcctgatctggtactt
actggacataaagataatgccgaattcgctttagctatgtgtcctacggagccctctgtg
ctatctggaggcaaggacaggtctgtggttttgtggagcatccaggatcatataacttct
ttggcagcagatcagggagctcaaaagtctccaggatccaccaagggcagtttagtcaac
ggtaaaactgcagatggccccactgttcaagctcgtggaattttcctcgggcatgaggat
actgttgaagatgtgcagttcaatccatcaagtgcacaggagttctgcagtgttggtgat
gattcttgcctcatattgtgggatgccagaacgggcaattctcctgccataaaggttgaa
aaagcccatgatgctgatcttcattgtgtcgactggaatcccaatgatgtcaatctaatt
ttgacaggatctgctgataatacagtacgtatgtttgatcgccggaatcttaattctgga
cgagttggaacccctattcacatatttgaagggcacagtgcagctgtgctttgcgttcag
tggtctccggagaagggaacagtctttggcagtgcagcagaagatggtatcttgaatatc
tgggatcatgggaagattggcaaggtggaggataacccaggagcagaagatgcaaattac
ccgtcaggactgtttttccgacatgccgggcacagggataaggtggtcgatttccactgg
aactcagcggatccatggacaattgtcagcgtgtctgaagatggagagaagactggtggg
ggcggtactctgcagatatggcgaatgatcgacctcatataccggccagaggacgaggta
atagctgagctggaaacattcaaatcccatctcttgacatgctctgattcttga
DBGET
integrated database retrieval system
