Andrographis paniculata: 127244888
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Entry
127244888 CDS
T08689
Name
(RefSeq) endoribonuclease Dicer homolog 2 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
apan
Andrographis paniculata
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apan03036
]
127244888
Chromosome and associated proteins [BR:
apan03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127244888
microRNA pathway
RISC loading complex
127244888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Helicase_C
DEAD
Dicer_dimer
ResIII
PAZ
dsrm
SWI2_SNF2
Cas3-like_C_2
AAA_22
SNF2-rel_dom
DUF1110
Motif
Other DBs
NCBI-GeneID:
127244888
NCBI-ProteinID:
XP_051121428
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MNGDSHKLAANPVSFARSYQLEALEKALEQNTVVFFETGTGKTLIAIMLLRSYAHLLRKP
SPHIAVFLVPTVVLVTQQGEAVSVHTDLRVGHYYGELGVDFWNAAMWKHEVDQHEVLVMT
PQILLNALRHKFLGLEQIKVLIFDECHNARGKHPYACIMTEFYHRELASSTPQLPRIFGM
TASPIKAKASNSSAAYWKQISELENLMNSKVYTCESNEVIAQHVPNSTAKLKEYNHVDIS
QMTHACLYELNNLLSKHRLSISALDISESDAEAARKKLHQLWSTLMYCSTELGIWLAMKA
AEVYSRQEDVFLWDKMDISVERVLRAFSSDAVKAFSQCIASGSHWSSCQDLMHNMSAGYL
TSKVMCLIEILLEYREASDLRCIIFVQRIVTSIVLKCFLNELLPNICGWTTEYTAGNTSK
LRSQSRKEQNAIIDKFRNGKVNIIVSTSLLEEGLDVQSCNLVIRFDASANLCSFIQSRGR
ARMQNSDFVLMVKSGDGPARARVESYLSGVDIMRRECVEHYDVPCEPLGDEMHGEPWYEV
ESTKAIVTLSSSVSLLYYYCSRLPSDGYFKPHPRFSYNKELESCTLHLPNNCPIQTVAVQ
GSTKFLKPLVCLEACKELHKVGALTDYLVPDIVEEERDAQYCAIDYHDEHSKYFPPELLG
SCDNKSETLYHCYLLELKSNCQYDVNLQDILLVVRTKLPTDLEGLSLDFDIDRGSLTVHI
KYIGYVMLSSVLVSRCQRFQLTIFKILLDHNLNKLSEEMDKFSKRDGSAIFDYLLLPALH
LNGTVNMDWKSINAVLYPENTFWDEHTHCFSTRGHGHYVHTKDSLVCCCHLEKSLVRTPH
NDYLYCVTGTLDGIDGNTNFTLEDGTRLTYKRYYEQRHGISLQFEGEFLLHAKRIFNVQN
YLHRCRTPTKKESSTNSYELPPELCSIIMAPVSVSTFYTFSFLPSVMHRIQSLLMAYNLK
TMHLDPCGQNVVVPTVKVLEAITTKKCQEKIHLESLETLGDSFLKYVATKQLFQVFQNRH
EGLLSAKRERIICNATLCKLGCDRKITGFVRNEPFDPKAWIIPGSNCADHILGEEVISST
RFGVGRIRKLKSKIIADVVEALIGAYLSTGGEAAALSFMVWLGIEIDSVGIPYTRNFAVK
PEVHVNIGYFQSLLNYTFRDASLLVEALTHGSYMLPEIPGCYQRLEFLGDAVLDYLITKH
LYYKYPNLSPGLLTDLRSASVNNECYALSAIKAGLYKHVLHTSQVLHKQIVHSVRKFKES
GMASTFGWESETTFPKVLGDVIESLAGAIYVDSGYNKEVVFECMRPLLEPLVSPETVKLH
PVRELSEVCQREHYVLMKPVVSYKNGVAHATVEVDANGVLHRETCCEADKKTAKKLACKA
VLKSLKESMLSTMSCG
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagatagccataaacttgctgcaaatccagtctcctttgccagaagttatcaa
ttggaagctctagagaaagcactggaacagaatacggttgttttctttgagaccggaact
gggaagactctaatagcaatcatgcttcttcgaagttatgctcatcttctccgaaagcct
tcaccccacattgctgtttttttggtccctactgttgttctggtaacccaacaaggtgaa
gcagtgtctgtccatactgatttgagagtgggccactattatggtgagttgggtgtcgac
ttttggaatgcagccatgtggaagcatgaggtggaccaacacgaggtgcttgtcatgact
cctcaaatattgctcaatgctttgaggcacaagttcttgggactcgagcagataaaggtt
ttgatattcgatgagtgtcacaatgcgagaggcaagcacccgtatgcttgcataatgacg
gaattttatcatcgggagttggcatcaagtactccacagcttcctagaatatttgggatg
actgcttccccaataaaggctaaagcctcaaattcatcggcagcctactggaagcaaatt
agtgaacttgaaaatcttatgaattcaaaggtctacacatgtgagtctaatgaggtcata
gctcagcatgttccaaattcaaccgcaaaattgaaggaatacaatcatgtagatatttct
cagatgactcatgcatgtctatatgagttgaataatttgctatctaagcatcgcctttct
atcagtgcactggatatttcagaatctgatgctgaagcagcacgaaaaaaattacaccag
ctttggtctactttaatgtattgttcaacagagctaggcatttggttagccatgaaagcg
gcggaggtctactctcgtcaagaagatgtgtttttatgggataagatggacatatctgtt
gagagagttcttagagctttcagttcagatgcagtcaaggccttttctcaatgtattgca
tcaggttcacactggtcaagctgtcaggatttaatgcataacatgagtgcagggtatctt
acatccaaagtgatgtgtctcattgagattcttcttgagtacagggaagcatctgatttg
aggtgcataatatttgttcagaggatagtgacttcaattgtacttaaatgttttctaaac
gagttactcccaaatatatgtggttggaccacagagtacacagcaggaaacacaagtaag
ctgcgttctcaaagtagaaaggaacaaaatgcaattattgataaatttcgaaatgggaag
gtaaacatcatcgtttcaacctccttgttggaagaaggtttagatgtgcaaagttgcaat
cttgttattcgattcgatgcttctgcaaatctatgtagctttattcagtcccgtggtcgt
gctcgaatgcagaactcagattttgtattaatggtgaaaagtggtgatggtccggctcgg
gctcgtgtggagagctatttgagtggtgtagatatcatgcggagagagtgtgtggaacat
tatgatgttccttgtgaaccacttggtgatgaaatgcatggtgagccatggtacgaagtt
gaaagcaccaaagcaattgttacactgagttctagtgtgtcgctgctgtactattattgc
tcacggctgccttcagacggatatttcaaacctcatccacggttttcctataataaggag
ctggaaagctgcacattacaccttccaaataactgccctatccaaactgttgctgtccaa
ggaagcaccaaatttctaaagccacttgtatgcctggaagcttgcaaggaacttcacaaa
gttggtgccctgacagattatcttgtaccagatattgtggaggaagaaagggatgctcag
tattgtgcaatagactatcatgacgaacattcaaaatacttccctccagaactgcttggt
tcttgtgacaacaagtctgaaacactgtatcactgctatttacttgagctaaagtccaac
tgccaatatgatgtcaatcttcaagacatcttgttggttgtccgcacaaagctacccact
gatctcgagggtttgagccttgattttgatatcgatagggggagtcttacagtgcacata
aaatatattggatatgtgatgctgagttccgtgctggtttctcggtgtcaacgcttccag
ctgactattttcaaaattcttcttgatcataacctaaataagcttagtgaagaaatggat
aagttctcaaagagagatggctctgcaatatttgattatcttcttcttccagctctacac
ttaaatggaactgtaaatatggactggaaatccatcaatgctgtgttatacccagaaaat
actttctgggatgaacatactcattgtttttcaactagaggtcatggccattacgtacac
actaaggatagtttggtgtgttgctgccatttagagaagtcgttagtccgtacacctcat
aatgattatctgtattgtgttactggaactttggatggcattgatggtaacacaaatttt
acacttgaagacggaactagacttacatataaaagatattatgagcaaagacatggtatc
agcttgcaatttgagggagagttccttcttcatgcgaagcgcatttttaatgtgcaaaac
taccttcacagatgtagaactccaaccaagaaagaatcgagcaccaattcctatgaatta
ccacctgaactttgttcgatcatcatggcgcctgtatctgtttctacgttctatactttc
tcattccttccatccgttatgcatcgtattcagtcactgcttatggcttacaacttgaaa
actatgcatttggatccgtgtggtcaaaatgttgtcgttcctactgtcaaggttttggag
gcaatcactacgaagaaatgtcaagaaaaaatacatttggaatctttggagacacttggt
gactcttttctgaaatacgttgctacaaaacaattatttcaagtgtttcaaaataggcat
gagggacttcttagtgcaaaacgagagagaataatctgcaatgccacattgtgcaagttg
ggatgtgaccgcaaaatcacgggctttgtacgcaatgaaccatttgatccaaaagcatgg
ataatacctggctctaattgtgccgatcatattctaggtgaagaggttatttcatctaca
agatttggagttgggagaatcaggaaacttaaaagcaagattatagcagacgtagttgaa
gcactaattggtgcttacctcagcacagggggtgaagctgcagctttatcatttatggta
tggcttggcattgaaatcgactctgttggtataccttatacaaggaactttgcagtgaag
ccagaggtgcatgtcaatatcggatattttcagtctctcttaaactacacttttcgagat
gcttctctcctggttgaggccttaacacatggctcctatatgctacccgaaattccagga
tgttaccagcgcctggaatttctcggggatgcggtgctagattatctgatcactaagcat
ctctactacaagtaccccaacctctctcccggattactgaccgatctaagatctgcatca
gtgaataatgagtgttacgctctatcggcaatcaaggccgggctgtacaagcatgtactc
cacacttcccaggtgcttcacaagcaaatagtccactctgtaagaaagttcaaggaatcc
ggcatggcctcaactttcgggtgggaatcggagacaactttcccaaaggtgctgggcgac
gtaatagaatctctagccggggccatatatgtcgactcggggtacaataaggaagtggtt
ttcgaatgtatgcggcctcttcttgagccgctggtgtctccggagacagtgaagctccat
ccagtgagggaattgagcgaagtatgtcaacgagagcattatgttctgatgaagccggta
gtttcgtataaaaacggcgtggcgcacgctacggtggaggttgacgcgaacggggtattg
catagagagacatgctgtgaagcagacaagaaaacagccaaaaaactagcctgcaaagct
gtgctaaagtccctaaaagaaagcatgttatcgacgatgtcctgtgggtag
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integrated database retrieval system
