Andrographis paniculata: 127244894
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Entry
127244894 CDS
T08689
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
apan
Andrographis paniculata
Pathway
apan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127244894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127244894
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
127244894
U7-dependent histone pre-mRNA processing factors
127244894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
127244894
NCBI-ProteinID:
XP_051121438
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MGTSVQVTPLCGVYNENPLSYLVSVDSFNFLIDCGWNDHFDASLLEPLSRVASTVDAVLL
SHPDTLHLGALPYAMKQLGLSAPVFATEPVFRLGLLTMYDHYLSRKQVSEFDLFTLDDID
SAFQNMTRLTYSQNYYMSGKGEGIVIAPHAAGHLLGGTVWKITKDGEDVIYAVDFNHRKE
RHLNGTVLESFVRPAVLITDSFNALLSNQPPRRQKDQQFLDVIVKTLRADGKVLLPVDTA
GRVLEILLILEQYWEQSNLTYPIFFLTYVSSSTIDYAKSFLEWMSDSIAKSFEHTRDNAF
LLKHVTLLVNKAELEKVPDGPKIVLSSMGSLEVGFSHDIFVEWAADSKNLVLFTERGQFA
TLARMLQADPPPKAVKVTMSKRVPLVGEELAAYEEEQNRKRKEEALKAALIKEEESKPTL
DAELGAGDPMDVDTTKKQPSSNAASLQSGAFRDVLIDGFVPPPNCAGPMFPFYDKSSEWD
DFGEVIDPDEYTIKDEDMDQLSTLVDGDLNGKLDEASASLLLDTTPSKVVSSEQTVYVKC
SLLYMDFEGRSDGSSIKKILGHVSPLKLVLVHGSAEATEHLKQHCLKSVCQHVYAPQIEE
SIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTNNGTLSLLPLSASAPPH
KTVLVGDIKMADFKQFLASKGFQVEFAGGALRCGDYVTLRKVGDSSQKGGGNIQYIILEG
PLSEEYYKIRDHLYSQFYAL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggggacttcggtgcaagtgacgccgctctgtggagtgtacaacgagaatccactttcc
tacttggtctcagtcgacagtttcaatttcctcatcgactgcggttggaacgaccatttc
gatgcttccttgctcgagccactctccagggtagcttcaactgttgatgctgttttgcta
tcacaccccgacacgctgcaccttggtgctttaccatatgccatgaagcagcttggtcta
agtgcccctgtgtttgcaactgagcctgtgttcagattgggactcctgaccatgtatgat
cactatctgtcgcgaaagcaagtgtcagagtttgatttgtttacactggatgatattgat
tctgcatttcaaaacatgaccagattgacttactctcaaaattattatatgtctgggaaa
ggagaaggaattgttattgctccccatgcagctggtcaccttttaggggggacagtttgg
aagatcacaaaagatggggaggatgttatatatgctgttgacttcaatcatcggaaggaa
aggcatttgaatgggacagttttagagtcttttgtgcgccctgctgttttaataacagat
tcgttcaatgctttgctgagtaatcaacctccgaggcgtcaaaaggaccagcaattctta
gatgtcatagtgaagacgttgagagcagatggaaaagtattacttcctgtagatactgct
ggtcgagtattggagatacttttaattctggaacagtactgggagcagagcaacttaaca
tatcctatcttcttcctgacatatgtttcatcaagcacaattgattatgctaaaagtttt
cttgagtggatgagcgactcaatagcaaaatcctttgagcacaccagagacaatgctttt
cttttgaaacatgtaacacttttagtcaacaaggctgagcttgaaaaggtccctgatggt
ccaaagatagtcttatcatccatgggaagtttagaggttggattttctcatgatattttt
gttgaatgggcggcagactcaaagaatcttgtactctttactgagagaggccagtttgcc
acactggcacgaatgctccaggcagatcctcctcctaaagctgttaaagttacgatgtca
aagagagttcccttagttggagaggagttggctgcttatgaagaagaacaaaatcgaaaa
agaaaggaagaagctcttaaagctgctctcatcaaagaagaggaatcaaagccaactttg
gatgcagaacttggagcaggagaccctatggacgtggacactactaagaaacaaccatca
tctaatgctgctagtttgcaatccggagcattcagagatgtgctgattgatggatttgtt
cctcccccaaattgtgctgggcctatgttccccttttatgacaagtcatctgaatgggat
gattttggtgaggtgatcgaccccgatgagtacactatcaaggatgaagatatggaccag
ttatcaacactggttgatggtgacctgaatggaaagcttgatgaagcatcagcaagcttg
ctacttgatacaacaccgtcgaaagtagtgtcttcagaacaaacagtctatgtcaagtgc
tcactgctttatatggactttgaaggccgctctgatggcagctcaatcaaaaagattctt
ggtcatgtttccccattaaaacttgtcttggtgcacggatctgcagaagcaaccgaacat
ttgaagcaacactgtctaaaatccgtctgtcagcatgtttatgctcctcaaattgaagaa
tcaatcgatgtcacttctgatttatgtgcttacaaagttcaactttctgagaaattaatg
agcaatgttctgttcaagaagcttggcgattatgagatagcatgggttgacgccgaagtg
ggaaagacaaataacggtacattgtctttgcttcctctctccgcctctgctccgccacat
aaaacagttttggtgggcgatataaaaatggcagatttcaagcaatttcttgcaagcaaa
ggtttccaggtggaatttgccggtggagccttgcgctgtggggactacgtgactctacgt
aaagtcggagattccagccaaaagggtggtggcaatattcaatacatcattcttgaaggc
cccttatccgaggagtactacaaaattcgtgatcatctctactcacaattttatgcacta
taa
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