Andrographis paniculata: 127244938
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Entry
127244938 CDS
T08689
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
apan
Andrographis paniculata
Pathway
apan03022
Basal transcription factors
apan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127244938
09124 Replication and repair
03420 Nucleotide excision repair
127244938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127244938
03036 Chromosome and associated proteins [BR:
apan03036
]
127244938
03400 DNA repair and recombination proteins [BR:
apan03400
]
127244938
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
127244938
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127244938
Chromosome and associated proteins [BR:
apan03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127244938
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127244938
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
AAA_11
SNF2-rel_dom
NAMPT_N
Motif
Other DBs
NCBI-GeneID:
127244938
NCBI-ProteinID:
XP_051121499
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MKFQIEDVTVYFPYDNIYPEQYSYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYV
LSKPSNPVKLLYCTRTVHEMEKTLAELRFLHNYQVKHLGPSARILALGLSSRKNLCVNPS
VVSAENRDSVDASCRKLTASWVRAMAVENPNIPTCEFFENYEKAASDAVLPPGVYTLQDL
RTFGKEKGWCPYFLARHMVQFANVVVYSYQYLLDPKVAGIISKEMQRECVVVFDEAHNID
NVCIEALSVSVRRQTLEGATRNLSRMSQEIERLKATDAGRLRAEYNRLVEGLAQRGNLPL
GDAWLGNPALPDDILKEAVPGNIRRAEHFLSVLRRLVQYLKGRLQTENVEKEGPVTFVAS
INSQIGIDQKMLRFCYDRLHSLMLTLEITDTDEFLHIQTICDLATLVGTYTRGFSIIIEP
FDERMPHIPDPVLQLCCHDASLAIKPVFERFQSVVITSGTLSPIDLYPRLLNFNPVVSRS
FTMSLTRDCICPMVLTRGSDQLPVSTKYDLRSDPGVEKNYGKLLLEMVSVVPDGIVCFFV
SYSYMDGIVNSWHESGILKEIMQHKLVFIETQDVVETTLALDNYRKACDCGRGAVFFSVA
RGKVAEGIDFDRHYGRLVIMFGVPFQYTLSRILLARLEYLRETFQIKEGDFLTFDALVNS
DIHRQAAQCVGRVIRSKADYGMMIFADKRYSRHDKRSKLPSWILSHLRDAHLNLSTDMAV
HIAREFLRRMAQPYDKTGGMGKRTLLSQDDLEKIANGVEDLAF
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcaaatcgaagatgttacagtatacttcccctacgacaacatctacccggag
caatactcctacatggttgaactcaagcgcgctctcgatgccaaaggtcactgcctactg
gagatgcccaccggcaccgggaagacaatcgcccttctctcactaatcacaagctacgtc
ttgtccaagccctcgaatccggttaaattgctttattgcacccgtaccgtacacgagatg
gagaaaaccctagcggaattgaggttcttgcacaattatcaggtcaagcatttggggccg
tcggcgaggattcttgctctggggctttcatccaggaagaacttgtgcgtgaatccaagt
gttgtgtccgccgagaatcgggattctgtcgacgcctcgtgccggaagcttactgcgagt
tgggtcagagcaatggcggttgagaaccctaatattcctacgtgtgagttctttgagaat
tatgagaaggctgcctcagatgctgtcctgcctcccggagtttacacattgcaggatctt
aggacgtttgggaaggaaaaagggtggtgcccttacttcttagctcgccatatggtgcaa
tttgcaaatgttgtggtatatagctatcagtacctcctcgacccaaaagttgctggaatc
atatcaaaagagatgcagagagagtgcgttgtggtgtttgatgaggcccacaatattgac
aatgtgtgcattgaagcactcagtgttagtgtaagaaggcagacacttgaaggagcaaca
agaaatctgagtaggatgtcccaggagattgagaggttaaaggccaccgatgctggtcgt
ttacgcgcagaatacaaccggctggttgaggggttggcacagagggggaacctaccactt
ggtgatgcttggctcgggaatcctgctttacccgatgatatattaaaagaagctgtgcct
ggaaatatcagacgtgcagagcatttcttatctgttttgcgaagattggtccagtaccta
aaagggcgactacaaactgaaaatgtggaaaaggaggggcctgtcacatttgttgcttcc
attaattcacaaattggaattgatcagaagatgctaaggttttgttatgacaggcttcac
tcccttatgttaactttggagataaccgacactgatgaatttttgcatatccaaacaata
tgtgatctggctactcttgtgggaacctacactcgaggattttcaataataattgagccc
tttgatgaaagaatgccacatatacctgatcctgtactccagctttgttgtcatgatgcc
tccctcgctataaagcctgtgtttgaacgattccaatctgttgtaataacttctgggaca
ctgagccccattgatctctaccctcgacttcttaatttcaatcctgtggttagtcgaagc
tttacaatgtcattaacaagggattgcatatgcccgatggttctcacgcgtggaagtgat
cagctccctgtaagcacaaagtatgacctgagaagtgatcctggagttgagaaaaattat
ggaaaacttttgcttgaaatggtgtctgttgttcccgatggtattgtgtgcttctttgtc
agctattcttacatggatggaattgttaacagttggcatgaatctggaattctgaaggag
ataatgcagcataaactggtcttcatagagacacaggatgttgttgaaactacattagcc
ttagataattatcgtaaagcttgtgattgtggaaggggtgctgtgtttttctcagttgcc
aggggaaaagtggcagaaggtattgactttgataggcattacggcagacttgtaattatg
tttggtgttcctttccagtacacattaagcagaatcttgcttgcacgattggaatatttg
cgagagacgttccaaataaaagagggcgattttttgacttttgatgctttggtaaattct
gatatacataggcaagcggcccagtgtgttggacgagttatacgatcaaaggcagattat
gggatgatgatatttgctgacaagagatatagtcgtcacgacaagcgctcaaagttgccc
agttggatactatctcatttacgtgatgcacatctcaacttgagcacggacatggctgta
catattgcaagagagttcttgaggaggatggctcagccatatgacaagactggcgggatg
ggtaaaaggacgctactgtcccaggatgacttagagaagatagccaatggagtcgaggac
ttggccttttga
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integrated database retrieval system
