Andrographis paniculata: 127245302
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Entry
127245302 CDS
T08689
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
apan
Andrographis paniculata
Pathway
apan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127245302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127245302
03012 Translation factors [BR:
apan03012
]
127245302
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127245302
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127245302
Translation factors [BR:
apan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127245302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
PhoH
AAA_7
Motif
Other DBs
NCBI-GeneID:
127245302
NCBI-ProteinID:
XP_051122065
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MYLLCLKSPPPYSPPKTLNSHPPTPLYPIFRMKDRPPSYGALYVPPHHRRPATTTASSPT
DSDVTTYHPPDRPSSLSTSKVNWTDSCHAVDSYPYFPPQSSQKHCQQLREIWRRDEVAEQ
GSQREFEFSSQPSTTSENMIAWKWKLNSLLHNADKQELISKEKKDRRDFEQIEALATAMG
LYSNMYVKVVVVSKVPLPNYRFDLDEKRPIREVILPPNLVKRVDAYLAEYICQKYRSTDS
FSRSISDADICDESLFDQLDSLPHGNTPMEKFSWQRSLHMRDEQRTWQESPDGRKMMEFR
NSLPACKKKEVIVSAISQNQVVIISGETGCGKTTQIPQFILESEIDSMHGATCNIICTQP
RRISAISVSERISAERGEKLGETVGYKVRLEGMKGKNTHLLFCTTGILLRRLSVDRNLMG
VTHIIVDEIHERGINEDFLLIILKDLLPRRPDLRLILMSATLDAGLFSTYFGGAPVVHIP
GFTYPVQTHFLENILEATGYQLTANNQIDDYGVERMWKMSKPATRKRKSQIASAVEEALS
TADFSDCTAQTRQSLSCWNPDFLGFNLIEHLLCNICENKRPGAVLVFMTGWEDICSLKEK
LQAHPVLGDTNQVIVLACHGSMGSAEQKLIFDKPEDGIRKIVLATNIAETSITIDDIVFV
IDCGKAKETSYDALNNTPCLLPSWISKASAKQRRGRAGRVQPGECYHLYPRCVYDAFADF
QLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEYLAIQNAIEYLKIIGALDENEDL
TVLGRYLTILPMEPKLGKMLVLGVIFNCLDPILTIVAGLSVRDPFLAPLDKKDLAEAAKA
QFSHEYSDHLTLVRAYEGWKVADRDLNGYDYCWKNFLSVQSMKAIDLLREEFYSLLKDVG
LVDSNPTTCNVWSYDEHLLRAIICYGLCPGVCSVVHNEKSFSLKTMDDGKVLLYSNSVNA
RYSRIPYPWLVFNEKIKVNSVFLRDSTAVSDSMLLLFGGRISKGDTDGQLKMLNGYLEFY
MDPLIADLYQSLRRELDNLIQTKLLYPTMGIHFSHKLISAIRLLISQEECGSRFVFSHQG
HMHSIHSIGASILATDANRKPILVCNTESGPGGDNSKSQLQTLLTRAGYAAPRYKTNQLK
INQFRAIVEFNGMQIAGQPCNNKKQAEKDAAAEALRWLLGRNGDGVDHDFIDNMSMLLKK
SKKSHT
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcctctgcctcaaatctcctcctccatattctccccccaaaaccctaaattcc
cacccccctactcctctgtacccaatcttccgaatgaaggaccgccctccttcttacggg
gccctctatgtgcctccccaccaccgccgccccgcaaccactactgcctcatcccccacc
gattcagatgttaccacttaccaccctcctgaccgtccgagctcgttatctacttctaaa
gttaattggactgatagttgtcatgctgttgattcttatccttactttccacctcaatca
tctcagaagcattgccaacaactgagggaaatttggcgacgtgatgaggtggccgagcaa
gggtcccaacgtgaattcgagttttcatcacaacctagtactacttcagagaatatgatc
gcatggaaatggaaattgaattctcttttgcacaatgctgataagcaagagctaatatca
aaagagaaaaaggataggcgtgattttgagcaaatagaagctttagcaactgcaatgggc
ttatatagtaacatgtatgtgaaagtggttgttgtcagcaaagttccattgcccaattac
cggtttgatcttgacgagaagcgtcccattagggaggtgatcttgccccccaacttagtt
aaacgcgtggatgcatatcttgctgaatacatatgtcagaagtacaggagcacggattcc
ttttcaagatcaattagtgatgctgatatctgtgatgaaagcctctttgaccaactggat
tcacttccacatggtaacactcccatggaaaaattttcctggcaaagaagtctgcatatg
cgggatgaacaacgcacttggcaggaatctcctgacggtagaaagatgatggaatttcgc
aatagtctccctgcttgtaagaagaaagaagttatcgtgagtgctatttcacagaaccag
gttgtcattatctcaggtgaaactggttgtgggaaaactactcagattccccaatttatt
ttggagtctgagattgactctatgcatggggccacatgtaatattatatgcactcaacct
agaagaatttctgcgatttcagtgtctgagaggatatctgctgagagaggggagaaactg
ggggaaacagttggatataaagttcggctggagggtatgaaaggaaaaaatacgcacctc
ctcttctgcacaactggaatattgctccgcagattgtctgttgatagaaacttaatgggg
gtgactcatattattgtggatgaaattcatgagcgtgggatcaatgaagattttctgctc
attattctcaaagatcttcttcctcgccgaccagacttgaggttgattttgatgagtgca
actttagatgcaggacttttttcaacatactttggtggggctccagtggtccatattccg
ggttttacttatccagtacagactcatttcttagaaaatattttggaggcaacagggtat
cagttgacagctaataatcaaatagatgactatggagtggaaaggatgtggaagatgagc
aaaccagcaacaagaaagagaaagagccaaattgcttctgcggttgaggaggcacttagc
actgctgacttcagtgactgcacagctcagacaaggcagtctctgtcatgctggaatcct
gattttctgggtttcaacctaatagagcatcttctttgcaacatatgtgaaaacaagaga
cctggtgctgttttagtttttatgactgggtgggaagatatatgctccctgaaagaaaag
cttcaagctcatcctgtacttggagatacaaatcaagttatagtgttggcatgccatggt
tctatgggcagtgcagaacagaaattaatttttgacaaacctgaggatggaatacggaag
attgtcttagccaccaatattgctgaaaccagcattacaattgatgacatagtatttgtt
atcgactgtggaaaggcaaaggagacgtcatatgatgcgctaaataacactccttgcctg
cttccttcctggatttcaaaggcttctgctaaacaaagaagaggtagagcaggacgcgtt
cagccgggagaatgctaccatctctatccaagatgtgtgtatgatgcttttgcagacttt
caattgcctgaaattctaaggactcctctgcagtccctttgtttgcaaatcaagagtttg
aaacttggcagtatctccgagttcctatctagggcattgcaatctccagagtatcttgcg
attcaaaatgctatagaatacctaaagatcattggggctctagatgagaatgaggatttg
actgttttggggcgctacctgaccatacttcccatggaacccaaacttgggaaaatgctt
gttcttggtgttatttttaattgcttggatccaattttaactatagttgcaggtttaagt
gtccgtgaccctttcttagctccattggataagaaggatttggcggaagcagcaaaagca
cagttctcacatgagtacagtgaccatcttactcttgtccgggcatatgagggttggaag
gttgcggatagagatctcaatggatatgattattgctggaagaactttttgtctgtgcag
tcaatgaaagccattgatttgctccgtgaggaattctactctttgctaaaagatgttggt
cttgtggatagcaatccaactacttgcaatgtttggagctatgatgagcatctcctgcga
gcaatcatttgttatggcttgtgtcctggagtttgctctgttgtgcacaatgagaagtcc
ttctccctgaaaacaatggatgatggtaaagtgcttttatactctaactcagtgaatgca
cgttactcaagaatcccatatccatggcttgtcttcaatgaaaaaattaaagtgaactct
gtctttctgcgggattccactgctgtatcagattcaatgttgctcttatttggtggtcgc
atctcaaaaggagatacggatggacagttgaaaatgttgaatggatacttggagttttat
atggatcctttgatagcagacctataccagagtttgaggagagagcttgacaacttaatt
cagaccaagctcctttatcccacaatgggaatacatttctctcataaactgatttctgca
attcgtttgctgatctcacaagaggaatgtggaagcagatttgtatttagccatcaggga
catatgcattccattcattctatcggtgcatcaattttagccactgatgcaaatagaaaa
ccaattttggtatgcaatacagagagtggccctggaggagataactcgaagagccaacta
cagacattactcactcgggcaggctatgctgcacccagatacaagaccaatcagctaaag
atcaaccaatttcgagctattgtggaattcaatggtatgcagatagctgggcaaccttgc
aacaataagaagcaggcagaaaaggatgctgcagctgaggctctgcggtggctgctcgga
aggaatggagatggagtggatcatgattttattgacaatatgtcaatgctgctaaagaaa
agcaagaagtctcacacataa
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integrated database retrieval system
