Andrographis paniculata: 127246228
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Entry
127246228 CDS
T08689
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
apan
Andrographis paniculata
Pathway
apan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127246228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127246228
03012 Translation factors [BR:
apan03012
]
127246228
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127246228
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
127246228
Translation factors [BR:
apan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
127246228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
dsrm
HA2_N
AAA_22
nSTAND3
AAA_16
AAA_19
ATPase
T2SSE
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
127246228
NCBI-ProteinID:
XP_051123438
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MHSRLRIIFARAAAISAASLSRSTELAVFERYTRVADLAGKSRWRHLDSYSGVLRRGFCG
FAVEQFSDDEYECDYENNPASSSVANIDEWKWKLSMLLRSDTNQEIVSKDKRDRRDFEQI
SNLAKRMGLYCEIYGKVVVASKVPLPNYRPDLDDKRPQREVVIPLTLQRRVEGLLQEHLD
RMIMNSDKGCNEFNKMEPDGHLENGDSTEQTDSFLDGSVMEKILQRRSLRMRNMQRAWQE
SPEGRKMNDFRKSLPSFREKEQLLQAIAMNQVVVISGETGCGKTTQLPQYILESEIESGR
GAFCSIICTQPRRISAMAVAERVSSERGEPVGESVGYKVRLEGMKSKNTHLLFCTSGILL
RRLLSDRNLDGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLILMSATLNADLFSK
YFGEAPMIHIPGFTYPVRAHFLEDILEMTGYKLTSFNQIDDYGQEKLWKTQRQLAPRKRK
NQITTLVEDALNKSNFENYSSRVHESLSSWTPDCIGFNLIEAVLCHICRKERAGAVLVFM
TGWDDISCLRDQLKAHPLLGDPNRVLLLTCHGSMATSEQKLVFERPPPNIRKVILATNMA
EASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECYHL
YPRCVYEAFAAYQLPELLRTPLNSLCLQIKSLQVESIGDFLSAALQPPEPLAVQNAIDFL
KLIGALDENESLTHLGKFLSVLPVDPKLGKMLIMGAIFHCFDPILTIVAGLSVRDPFLLP
QDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSIQTLQAIHS
LRKQFTYILKDAGLLDMDGITNNRLSHNQPLVRSVVCSGLFPGIASVVHRETSMSFKTMD
DGQVLLYANSVNARYQTIQYPWLVFGEKVKVNTVFIRDSTGVSDSILILFGGKLDCGSLA
GNLKMLGGYIDFFMDPSLAECYLKLKEELDELIQKKLRNPRIDIQKEGKYLMHAVQELVA
GDQCEGRFVFGRESKKPREPDNNDRFTQDGTNPKTLLQTLLTRAGHSPPKYKTKHLKTNE
FRGLVEFKGMQFVGKPKRNKVLAEKDAAIEALAWLTHTSDNTKHDEDDHSPPDVTDNMLK
LLGKRRKSKRHPR
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcattctagactcagaattatttttgcgcgcgccgccgctatttccgccgcctcgttg
tctcggagcacggaacttgcagttttcgaacgctatactagggtagcggaccttgccgga
aaatctcgctggcggcatttagattcctattctggcgtgcttcggcgaggtttctgtggc
tttgccgttgagcagttctccgacgacgagtatgagtgcgattacgaaaacaaccccgca
tcatcatcagtggctaatattgatgagtggaaatggaagcttagcatgttgttacgaagt
gatacgaatcaagaaatagtgtccaaagataaaagggacaggagagacttcgagcaaata
tccaaccttgcgaaacggatggggctttattgcgaaatatatgggaaagtagtagttgcc
agcaaggttcctcttccaaactatcggccggatctggatgataagcggcctcaaagggag
gtggtcattcctttgaccttgcaaagaagggtggagggattgctccaggagcaccttgac
agaatgattatgaactctgacaaaggttgtaatgagtttaataaaatggagcctgatggt
catcttgaaaatggagattctactgagcaaacagattcatttcttgacggctctgtgatg
gagaaaattctgcagaggcggagcttgcgaatgcgtaatatgcagagagcatggcaggaa
tcacctgaaggcaggaagatgaatgatttccggaagtctctcccttcgttcagggagaag
gaacagcttcttcaagcaattgctatgaatcaggttgtggttatttccggtgagactgga
tgtggtaagacgacacaacttccccagtatattttggaatctgaaatagaatctggtagg
ggagccttttgtagcataatttgtacgcagcctcgaagaatatcagctatggctgttgca
gaaagagtatcctcagagaggggagagccagttggagaatcagttggatacaaagttcga
ttagagggaatgaaaagcaagaatacacatttgctcttttgtaccagtgggattttgctc
cgtagactcttgagtgatagaaaccttgatggcataactcatgtttttgttgatgaaatt
cacgagcgaggcatgaatgaagacttcttgttgattgtcttgaaggatcttcttccacgc
aggagggatttgagattgatcttgatgagtgccaccctaaatgctgatctattctcgaag
tactttggtgaagcacccatgattcacattcctgggttcacgtatcccgtaagagctcat
tttctggaagatatacttgaaatgactggatacaagctgacttctttcaaccaaatagat
gattatggacaagagaagttgtggaaaacccaaagacaactagcaccccggaaaaggaaa
aaccaaattactacgcttgttgaggatgcactgaataaatcaaattttgagaattacagc
tctagggtgcatgaatcattgtcatcttggacacctgattgtattggtttcaaccttatt
gaagccgtattgtgccacatttgccgcaaggaacgtgctggggctgtactagtatttatg
acggggtgggatgatattagttgtttaagggatcaattgaaagctcaccctctgttaggc
gatcctaatagggtcctgctgcttacatgccatgggtccatggcaacctctgaacaaaaa
cttgtgtttgaaagaccacctcctaacatccgcaaagtcatacttgccactaatatggct
gaggcaagtattactatcaatgatgtagtttttgttgttgactgtggaaaagctaaggaa
accacttatgatgccttgaacaacacaccctgtttgcttccttcatggatatcccaagct
tctgctcgacaaagaaggggacgtgctggtcgtgttcagcctggcgagtgctaccatctt
tatccacgatgtgtttatgaagcttttgcggcatatcagctccctgaacttctaagaacc
ccattaaactctctctgcttacaaattaaaagtttacaagttgaaagtattggagacttt
ctgtctgctgctcttcagccacctgaaccattggctgtgcaaaatgctattgattttttg
aagttgattggtgcattagatgaaaatgagagccttacgcatcttgggaagttcttatct
gtccttccagtggaccccaaactggggaaaatgctaatcatgggtgctatttttcattgc
tttgaccctatattgacgattgtggctggtctcagtgttagggatccttttctcttacct
caagataaaaaagacttggctggaaccgccaagtccagattttctgcaaaggactatagt
gatcatatggctcttgtgcgtgcatatgaagggtggaaggatgcagaaagagaaggatcc
gcatatgaatattgctggagaaacttcctttcaatccaaactcttcaagctatccattct
ctccgtaaacaattcacctacattctgaaagatgccggtttgctagacatggatggaata
actaataacagattaagtcacaatcagccattggttcgttcagttgtatgctctggtctc
tttcctggtattgcttccgtagtgcacagagaaacatcaatgtcttttaaaacaatggat
gatgggcaggtcctgttatatgcgaattctgtcaatgcccgatatcaaaccatacaatac
ccatggttggtgtttggtgagaaggtgaaagtcaatactgtgtttatacgcgattcaact
ggcgtatctgattctattttgatcctcttcggtggtaaactggattgtggctctttggct
ggaaatctaaaaatgctgggaggatatatcgacttcttcatggatccaagcttggcggag
tgctatttgaaactcaaggaagaactcgatgagcttatacaaaaaaagcttcgaaacccc
cggattgacatccaaaaggagggcaagtacctgatgcacgccgtgcaggagctcgtggca
ggcgaccaatgcgaagggaggtttgtgtttgggcgcgaaagcaagaaaccgagagagcca
gacaacaacgataggttcacccaagacgggactaatccgaagaccctacttcagactctg
ttgacgagagccggccactcgcctcccaagtacaaaacgaagcacctcaagacgaacgaa
ttcagaggtctggtggagttcaagggcatgcagtttgtcgggaagccgaagagaaacaag
gttctggcagagaaggatgctgccatcgaagcgttggcctggctgactcacacttctgat
aatactaagcacgacgaagatgatcactcgccacccgatgtcactgacaacatgctcaag
cttcttggcaagcggaggaagtccaaacggcatcctcgttga
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integrated database retrieval system
