Andrographis paniculata: 127246989
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Entry
127246989 CDS
T08689
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
KO
K14829
pre-rRNA-processing protein IPI3
Organism
apan
Andrographis paniculata
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apan03009
]
127246989
Ribosome biogenesis [BR:
apan03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
127246989
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_VPS8
WDR54
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_LRRK2
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
127246989
NCBI-ProteinID:
XP_051124638
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MDAEVVIASSPTDAGISCWDLHTGAEQLRYKSCASPPHGLASVGGRFLASSQIRDPKSSN
SGSVLYWSLNKPQVEVRSFPAEAIKPLVANSQGTYIAGGGVSGDIYFWEVATGKLLKKWH
AHYRAVTCLVFNDDQSLLISGAEDGCVRVWSLFLIFDDARRDEARYLYEYSFHEHSLRVT
DVKSGYGGCNAIIVSASEDRTCKVWSLSKGKLLRNIVFPAMIDAISLDPGEHVFYAGSRD
GKIYIAGLNAVVTSTSNYGPHILGSLSEHSKAITCLSSSADGFLLVSGSEDGMVRVWDTR
KRTIVRVLQHTKGPLNNVLVIKQHQTINPRTSFNSLATPLRRHGGTLPPPLEKFANSPEE
NTHIKAFVGPQTALSQPLYFPYRCRSILAMEAHLQELQQQRSSATPAPEVDAELLKSELQ
RSLEMRQRWQKMFQEMHQFCVNELLDGSQTTGNGNGNHS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgaagtagtgattgcctcatctccgacggatgcgggaatcagctgctgggac
cttcacaccggagccgagcaacttcgatacaagtcttgcgcctcacctccacacggcctt
gcgtccgtcggcggccgctttctcgcttcctcccaaattagagaccccaagtcttccaat
tcaggatcggttctctattggtccttgaacaagcctcaggttgaagttaggagtttccct
gcagaagcaataaagccactagtcgcaaatagtcaaggaacttatattgctggaggtggt
gtttcaggggatatatacttttgggaggttgcaactgggaaattgctgaagaagtggcat
gcgcattaccgggctgtgacgtgcttggtgtttaatgatgaccagtctcttctgatttca
ggggcggaggatggatgtgttagggtttggtcactcttcttgatttttgatgatgcaagg
agggatgaagcaaggtatctatatgaatacagttttcatgagcattctttgagagtgact
gatgttaagtcgggttatggtggttgcaatgcaatcatcgtgtctgcttctgaggatcga
acatgcaaggtttggagcttatctaaagggaaattactgcggaatattgtcttccctgca
atgatagatgcaatttcattggaccctggggagcatgtcttttatgctggtagtagagat
ggcaagatatacattgctggattaaatgctgtcgtaacctccaccagcaattatggaccg
catatacttggttcactttcggagcacagcaaagctataacctgcttgtcgtctagtgct
gatggattcctattagtttctggatccgaggatggcatggttagagtttgggatactaga
aagcgaaccatcgtccgagttcttcagcacacaaaaggtcctctaaataatgttcttgtc
ataaaacaacaccaaactataaatcctcggacatcttttaattccctcgctaccccatta
agaaggcatggtggaacattaccacctccactggaaaagtttgctaattcaccggaagag
aatactcacattaaagcattcgttggtccacagacagctttgagccaaccattatacttt
ccgtacaggtgtaggagtattctagcaatggaagctcacttacaagaacttcagcaacaa
cgttcctctgcaacgccggcacctgaagtggatgccgagttactaaaaagtgagcttcaa
cgatccttggaaatgcgtcagcgatggcaaaagatgttccaagagatgcatcaattctgc
gtgaacgagcttttggatggcagccaaaccacaggaaatggcaatggaaaccattcatga
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