Andrographis paniculata: 127247246
Help
Entry
127247246 CDS
T08689
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
apan
Andrographis paniculata
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apan03041
]
127247246
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127247246
Spliceosome [BR:
apan03041
]
Complex C
Other components
Complex C specific factors
127247246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
AAA_30
AAA_7
ResIII
nSTAND3
UDI
AAA_11
T2SSE
AAA_23
AAA_29
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
127247246
NCBI-ProteinID:
XP_051124983
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MSRFWKPGAEKPRIEDDEEGGVLFYASSSSASSGYGYANIEAQRRRLPVYKYRTAILYLV
ETHATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQSVASRVSEEMGVK
LGDEVGYTIRFEDISNKELTRIKFLTDGVLLREMMDDPLLSKYSVIMVDEAHERSLSTDI
LLGLLKKIQRRRPELRLIISSATIEAQSMASFFNISHRRHQGAEEADHGPKKDPAILSVE
GRGYNVEIFYVEEPISDYVQAAVSTVISIHDEEPNGDILVFLTGQDDIDAAIQLLTEDSH
NRKKGLLVLPLYSGLPRADQDLVFSPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFSK
QRFYNPMTDIESLIVAPISKASARQRTGRAGRVRPGKCYRLYTEEYFLNEMPANGIPEMQ
RSNLVSCVIQLKALGIDNILGFDWPAAPTPQALIRALEVLYCLGVLDDDAKLTSPTGFQV
AEIPLDPMISKMILASNDYGCTEEVITIAAVLSIQSIWFSGWGAQKELDEAKLKYAAAEG
DHITFLNVYKGFMESGKSSNWCHKNHVNFHAMKKVDEIRKQLRRIVQRLGIPIKSCEGDV
QAIRKAVTAGFFANACLLEPFSHNGLYKTIRGSQEVYIHPSSVLFRVNPKAVVFHSIVST
DRQYMRNVMAIDPSWLTEVAPQFYQQKLPNPRPS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagattctggaaacccggagcagagaagccgcgcattgaggacgatgaagaaggg
ggtgtattgttctacgcttcctcgtcatcggcatcttctgggtacgggtacgcaaacatt
gaagcgcagaggaggaggcttccagtgtacaagtatagaacggccattttgtatttggtg
gagacgcacgccacgaccattattgttggcgagacgggcagtggaaagactacgcagatt
ccccagtatttaaaagaagctggatgggctgacggtggccgggtgatagcttgcacacaa
ccaagacgtttggctgtgcagtctgttgcttctagagtttctgaagagatgggtgttaaa
ctaggagatgaagttggttacacaattcggtttgaagatatttccaataaggaactaaca
aggatcaaatttcttactgatggagtattgctgagagagatgatggacgatcctctgcta
agcaagtatagtgtcatcatggtagatgaagctcatgaacggtcgctttcaacagacatt
ttgttgggcctccttaaaaagatccaacggcgtcggcccgagcttcgtcttataatctca
tcagcaacaattgaagcacaatcaatggcttcttttttcaatatcagccatcgaaggcat
caaggtgcagaggaagcagatcatggaccaaaaaaagatcctgccatattgtcagttgag
ggtagagggtataatgtggaaattttctatgttgaggaacctatttcagattatgtccaa
gctgctgtttctactgtaatatctatacacgatgaggagccaaatggagacatacttgtt
tttcttactggtcaagatgacattgatgctgcaattcagttgcttacagaagattcccac
aatagaaagaaaggcttgcttgtcttgcctctgtattctggactaccacgtgccgatcaa
gatcttgtgttttctccaactcctcgtgggaagagaaaggtggtaatatcaaccaatatt
gcggagacctccttgacattagagggtgttgtctatgttgttgacagtggattttcaaag
caacgtttctacaatccgatgactgatattgaaagtttgatcgttgcgccaatatctaag
gcttctgcacgacaaaggactggtagggctggaagagttaggccaggaaagtgctacagg
ctttacacagaggaatatttcctgaatgagatgcctgctaatggtataccagagatgcag
agatcaaaccttgtttcttgtgttattcagttaaaagccttggggatagacaatattttg
gggtttgattggcctgcagcaccaactcctcaggcactgattcgagcacttgaagtattg
tattgtcttggagtccttgatgatgatgccaaactcacttcccctactggattccaagtt
gcagagattccattagatccaatgatctctaaaatgattttggcttcaaatgattatggc
tgtacagaggaagtcatcaccattgcagctgtgctttccatacagtcaatctggttttct
ggctggggagcacaaaaggaattggatgaagcgaaattgaaatatgctgctgctgagggt
gatcatattaccttcttaaatgtgtataaagggtttatggagtctggtaaatcttcaaat
tggtgtcacaagaatcatgtgaacttccatgctatgaaaaaggttgatgaaatccgaaaa
cagttgagaagaattgtacaacgtttaggtatccccataaaatcttgtgaaggtgacgta
caggcaataaggaaggcagtcactgctggatttttcgccaatgcttgtttgttagagcca
ttcagtcacaatggattatacaagaccataagaggttcacaggaagtttatattcatcct
tcttctgtgttattcagagtcaatcctaaggctgttgtattccattccatcgtctcaact
gatcgtcagtacatgcgaaacgtcatggctatagatccatcatggctaacagaggttgct
ccacaattttaccagcaaaagctgccaaatcccagaccatcatag
DBGET
integrated database retrieval system
