Andrographis paniculata: 127247374
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Entry
127247374 CDS
T08689
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
apan
Andrographis paniculata
Pathway
apan03020
RNA polymerase
apan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127247374
09124 Replication and repair
03420 Nucleotide excision repair
127247374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127247374
03400 DNA repair and recombination proteins [BR:
apan03400
]
127247374
Enzymes [BR:
apan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127247374
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
127247374
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127247374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
127247374
NCBI-ProteinID:
XP_051125161
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MYGGAYNYSDPNPGHHVVDLHEEDEDDEDENLEEEEDMESKQISQEDAWAVISAYFEEKG
LVRQQLDSFDEFIQNTMQEIVDESAHIEIRPESQHNPARSSDFVETVYRIKFSQIYLSKP
MMTESDGETNTLYPKAARLRNLTYSSPLYVDVTKKVVRKGHECEEVAETQEFTKVFIGKV
PIMLRSSYCSLYNLSEKDLTDLGECPFDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQ
PNKYAYVAEVRSIGEFQNKAPSGMFVRMLSRPGAKGGTSGQYIRATLPYIRTEIPIIIVF
RALGFVADKDILEHICYDFSDVQMMELLRPSLEEAFVIQNQQVALDYIGKRGSTVAVTKE
KRIKYAKEILQREMLPHVGTEEYCETKKAYYFGYVINRLLLCALGRRAEDDRDHYGNKRL
DLAGSLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNW
GQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAET
PEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTESFEEISPAVIPQATKVFVNGTWV
GIHRNPERLVKTLRNLRRQIDVNTEVGIIHDIRLRELRLYTDYGRCSRPLFIVENQMLLI
QKEDILALQQRESADDYSWHHIVGKGFVEYIDASEEETTMISMTINDLVNSRRSSGDAYT
ETYTHCEIHPSLVLGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLAYV
LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSIIMNQSSIDRGFFRSLF
FRSYRDEEKKMGTLVKEDFGCPNRDSTLGMRHGSYDKLDDDGFAPPGTRVSGDDVIIGKT
TPISPEEAQGKSARFTNKDHSTSLRHSESGIVDQVLLTTNADGLRFVKIRMRSVRIPQIG
DKFSSRHGQKGTIGMTYTQDDMPWTIEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAH
MGKEGDSTPFTDVTVDNISKALHKCGFQMRGFERMYNGHTGRLLSAMIFFGPTYYQRLKH
MVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDA
YRVHVCEKCGLIAVASMKKPSFECRGCKNKTDIVQVNIPYACKLLIQELMAMAISPRLLT
KEDKKMKGKEQKKAEAVCRGGGVWWVGRGGLDEFSTVDR
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgtatggaggtgcgtataactactcggacccgaatccgggccatcacgtggtggatttg
catgaggaggatgaagatgatgaggatgagaatttggaggaagaagaagacatggaatcg
aaacagatatcgcaggaggatgcatgggctgtgatcagtgcttatttcgaggagaagggc
ttggtgaggcagcaattggattccttcgatgagttcatacagaacacaatgcaggagatc
gtcgacgagtccgctcacatcgagatccgtcccgagtcccagcacaatcccgctcgatca
tccgattttgtcgagactgtatacagaatcaaatttagtcagatataccttagcaagcct
atgatgacagagtccgatggcgaaaccaacactctgtatccgaaagcagcgaggttgagg
aacttgacatactcatcaccattgtacgtggacgtcacgaagaaagtcgtgagaaaaggg
catgaatgcgaagaggttgcagagactcaagagttcaccaaagttttcattggaaaggtt
ccgataatgctgcgctcgagttattgtagtttgtacaatctatcagaaaaagacttgaca
gatttgggggagtgcccgtttgatcagggaggatactttataataaatgggagtgaaaaa
gttctcattgctcaagagaagatgagcacaaatcatgtttatgttttcaagaagcgccag
ccgaacaaatacgcttatgttgccgaagttagatccattggcgaattccaaaacaaggca
cctagcggcatgtttgttcgaatgctttcaagacctggtgcaaaggggggaacctctggt
cagtacattcgagctacactgccctacattcgaactgagataccgataattatagtgttt
cgcgcgttaggttttgtggcagataaagacattttagaacatatctgctatgattttagt
gatgtgcagatgatggagttactccggccttctttggaggaggcatttgttatacaaaat
caacaagttgctcttgactacattggcaagagaggttctaccgtagccgttacaaaagaa
aaaagaattaagtatgcgaaagaaattctccaaagagagatgcttccgcatgtcggtact
gaggaatactgtgaaactaagaaagcttattattttgggtatgttattaatagactatta
ctttgtgcacttggaagaagagcagaggatgatcgtgatcactatggaaataagaggctc
gatcttgctggctccttgttaggaggcttatttcgcatgctattcagaaaattgacgagg
gatgttcgatcttatgtgcagaagtgtgttgataatgggaaggatgtgaatttgcaattc
gcaatcaaagcgaaaacgatcactagtggcctcaagtattctcttgccacaggaaactgg
ggacaagcgaatgcagccggtactagagcaggagtctcccaggtgttgaaccgtttgaca
tatgcatcgacactttctcatctacgcagactaaactcacctattggtcgagagggcaaa
ctggctaaaccccggcagcttcataactcgcattggggaatgatgtgtcctgcagaaacg
ccggagggacaagcttgtggactggtgaagaatcttgcacttatggtgtatataacagta
ggatcagcagcacatccgattttggagttcttggaagaatggagtacagagagtttcgag
gaaatatcaccagctgttattcctcaagctaccaaagtattcgttaatggtacttgggtt
ggaattcaccgtaaccccgagcgactcgttaagactctgaggaacttaagaagacagatc
gatgtgaatacagaggttggaattatccatgatattcgtcttagggagcttcggctgtac
acagactatggtcgctgcagccgtcctttgttcatcgtcgaaaaccaaatgctgctcata
cagaaggaggacattcttgcattgcagcaacgggagtctgctgatgactacagttggcat
catattgtcgggaaaggatttgtcgaatacattgatgcatcagaagaggagactacaatg
atatcgatgacaataaatgatcttgtcaattcgaggcgaagttcaggcgatgcttacact
gaaacatacactcattgcgaaatccatccgtcgttggtgttaggcgtttgcgcttcgatc
ataccatttcctgatcacaatcagtcccctcgtaacacatatcaatccgcaatggggaag
caagcgatgggaatatatgttactaattaccaactacgaatggatacattagcatatgtt
ctttactatccccaaaagcctctcgtcacgactcgtgctatggaacatttgcattttcga
cagcttcctgccggcataaatgctattgttgccatagcttgctattctggatacaaccaa
gaagattctattatcatgaaccaatcttcgattgatcgtggattctttcgatccttattc
ttccggtcatatagggatgaagagaagaagatgggaacactagttaaagaggactttggg
tgtcctaatagagacagcaccctcggtatgcgacatggatcttatgacaagttagacgat
gatggattcgctccgcctggaactagagtgtccggagacgatgttattattggcaagacg
acgccgatttctccggaggaagctcaagggaaatctgctagattcacaaacaaggatcac
agcacaagtttacggcacagcgaaagtggaattgtcgaccaggttctattgacgaccaac
gctgatggattaaggttcgtcaagatacgtatgcgatcagttcgaatacctcaaatcggc
gacaaattcagcagccggcacggccaaaagggaaccatcggaatgacttacacacaagat
gatatgccgtggacaatcgaaggcattacgccggacatcatagttaaccctcacgccata
ccttctcgtatgacaattggccagctcatcgagtgcatcatgggcaaggttgcggcgcat
atgggcaaggaaggcgattccacgcctttcaccgatgttacggtagacaacattagtaaa
gctcttcacaaatgtggattccaaatgcgcggtttcgagagaatgtacaacggtcacacc
gggcgtctgctgtccgcaatgatatttttcgggcctacttattaccagcgactcaagcac
atggtggatgacaaaatccactctcgaggccgaggccccgtgcagatactaactaggcag
ccagccgagggacggtctagagacggtggtttgaggttcggggagatggagcgcgactgc
atgatcgcccacggagctgcgcactttctcaaggagaggctgttcgatcagagcgacgca
tacagggttcatgtttgtgagaaatgtggcctaatcgcagttgcgagtatgaagaaaccg
tcgttcgagtgccgaggctgcaagaacaagacagacattgttcaggtgaatattccttat
gcctgcaagcttttgatccaagaactcatggctatggctatttccccaaggctactcact
aaggaagacaaaaaaatgaaagggaaggaacagaagaaagcagaagcagtctgtcgaggg
ggtggggtgtggtgggtgggtaggggtgggcttgatgaattctccaccgtggatcgataa
DBGET
integrated database retrieval system
