Andrographis paniculata: 127248696
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Entry
127248696 CDS
T08689
Name
(RefSeq) uncharacterized protein LOC127248696 isoform X1
KO
K19026
spatacsin
Organism
apan
Andrographis paniculata
Pathway
apan04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127248696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apan03400
]
127248696
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127248696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
127248696
NCBI-ProteinID:
XP_051127133
LinkDB
All DBs
Position
Unknown
AA seq
3195 aa
AA seq
DB search
MDSNSHPFEEDGLPVLQLRKWDPSEFPYSPSDFREGFISPTRMSLLLLSYDSEGLLFPLV
RGKSLINNDPEVSHEETVSDTPKHKVSSSSEFVELDSRVDNVSGASSSGSADAFMSDVES
VAWGLCVDTCDQHEETSFRELLFVSGKHGVIVHAFSHFNESCKAIKPAHANRVGPGLWVE
WGPSMELPPNLDLEGESKCHLEASGEFSGSHADFMDGDQSVSSKAWLRTFYTRVDRLTSG
NDVYTKFPQRSLFPDNAIISFRILEEDTHFLDLLQRSTASCDKPNDNISASVINKPDTHP
DSRVSTTLDDSASNSRGGAVNSLYKCVKVFSNNSYQLVGFALSLTTPMDVSTGNGNDESH
IKILIAVARLVSWGLQWVYSINLKENLDRGPFEWVDFSFSHSFLVCLSSCGLISLYGAST
GAYVASVSVINKTGPGRSPNSLEQYSDDIPNKRSFKRLFVFPHSSLVGVIDDCGVTYTFR
ICDHVPEEHFSSEHTLSYQHCLGIGPLNAWEVGGAEIGYQRVLHNAHSQGISRSLRMGKT
SYFTDSLLGNENRTSKGTDIRCPRNTYALNINTSSGSTQIMNQKKFIGSDIQSSLLRKVF
LLPYGYSEDNIYCFSHFGITCLIKRQSGEKKWSQVVHYNLRLDFIMNDEMNCNLQSRETS
SIEAVGCNFNGFLYLVTKKGFSVVLPSISVPTNIFPVEAIGYWLPNCTARSWCSAGNLME
ISGIDKHLSPWKVEVLDRVLLYEGHEAAEKLCWENGLSLHISRIRRLQLALNYQEFDEIE
TSLGMLMGVNLEAEGILRLIFVAVYLMSHEVSNDSAISAASRLLALATSYSTMAIRKYGL
LQHKKVNLRSWDVRDNEGALLPLVLTDKEDDEEGNSRRLQEMSHFLVVVRRLQGQINAKF
RRPGQSLMGDAGLSADILEDESKGPVVSEDSIILDKSGLPETVPPASEADSASEDNLSLV
QVDKHGAKSPADFLGFDGVAMVSKGGGFGKRSLKFENPKDMIERWELDNMDLKTVVKDAL
HSGRLPLAVLRLHLHRSNSLLPGIEAHDTFNDVRIAGRAIAYDLFLKGEIQLALTTLQKL
GEDVETSLKQLVFGSVRRSLRVQVAEEMKKYAYLEPHELKILEMVSLIERVYPCNSFFST
LGTRKMEHKGGSNEDKPNEISLRLLHPLLNNLVIVCGEVDGVVLGPWKTVNEHSFAPEID
DDSNHAAYWTAAVAWSDAWDPTVIDRVLLDQPLLMGVHVLWESQLEYYVCHNEWLEVSKL
LDVFPSYALSNGSLSVRLDDVNQASSIEQGQKPTGMTGYNNYTSFLEEPDAVTISVPSVR
IFRFPANRACSDWLRMLMEQQLAKKFIFLADYWDGTENIVPLLARSGFMVDPHENLFLDG
TTGGTSDSVLVIGDASVNPEAIQALHKVVVHFCSQYNLLNLLDIYLDFHALAMDQNSLSF
ILDAAGDNEWARCLMLLRIKGKEYDASFSNARAVASRNFTLGKKFTYLETDDIIQAVDDI
AEGAGEMAALATLMFAPVPLQECLSSGSVNRNHSSAQCTLENLRPAIQEFPTLRNTLVAA
CFGHDTVCSNLTLKTKVSGYSDLMDYLNWREGVFFSSARDTSILQMVPCWFPKAVRRLVQ
LYVQGPIGWQSLADSATEELSILRDIYYVVNSSGHAQISATSWEASVQKHIEEELYASSL
EGAGVGLEHYLHRGRALAALNHLLASRVHKMTTDNSQRSQSGTSSTGQVNVHLDLQTILA
PLTESEESLLSSVIPLAIEHFNDSVLVASCAFLLELCGLSASVLRVDVAALSRISSFYKS
TDNNHLRQLSPKGAGFYQTAVEVDVAESLARALADDYLHRCSANMMQKDNGNNNVCNQPS
RALLLVLHHLERASLPAVSNGATCGSWLSTGNGDGAELRSQQKAASQYWQLVTTFCQMHN
IPLSTKNLAALARDNDWVGFLSDAQIGKYPIETVIQVASKEFSDPRLKTHILTVLKSMQS
RKKVGSTNLNTAESGAEVSLSHENPYIPVELFGIIAMCEKQEKPGEALLLKAKNLCWSIL
AMIASCFPDVSLLSCLKVWLEITAARETSAIKVNDIASQIARNVGAAVEATNSLSPGART
TAFHYNRKNSKRRRLSESIPQDSSSLAVSDISKVPGVSTITGVNCQEEMDKLGDGDAIYS
SDSDSMANALSRMVAVLCEQHLFLPLLQAFEIFLPSCSLLPFIRALQAFSQMRLSEASAH
LGAFTISVKEEPLLHTQSNWEREEKIGKSWTSSMAVKAADAMLRTCPSPYEKRCLLRLLS
ATDFGDGGAIAARYGQLSWKIDMAEPSLRSDECPLLGNETLDDASLLTELEKNGYWEQAR
SWAKQLEASGESQWKSAANHVTEMQAEAMVAEWKEFLWDVPEERAALWSHCHTLFIRYSF
PGLLAGVFFLKHAEAVEKDIPARELHEILLLALQWLSGMITASNPFYPLHLLREIETRVW
LLAVESEAQAKGDGEDSLTQHTREQSGSSKDSNLIDRTATIITKIDNHINAMRFKSSENN
DRGNSHTHARITQTVDHGFSSTAEGSSKTKRRAKGIGSSKKPLYDPADKSFEPLNVRDES
QFMDENFKIDSSLSRWEERVGPAELEWAVLSLLDFGQTAAARQLQNKLSPGNTPPEFLLV
DTALKLASLSTPMNRVSVSALDNEVRSVILSYNISIGNGTIDPLEVLESLATILVEGSGN
GLCRRIISVVKAANVLGLTFVEAFEKQPIELLQLLSLKAQDSFEEAKLLVKTHTMPAASI
AQILAESFLKGLLAAHRGGYIDSQKEEGPAPLLWRFSDFLKWAELCPSDSEIGHALMRLV
ITGQEIPHECEVELLILSHHFYKLSACLDGVDVLVALAATRVEAYVWEGDFSCLARLITG
VGNFHALNFILGILIEKGQLDLLLQKYSAAADANSGAAAEAVRGFRMAVLTSLKQFNPDD
LDAFAMVYNHFDMKHETAALLELRAKQSSQLWFLRYDKDHHEDLLDSMRYYIEAAEVHSS
IDAGNKTRKACAQASLVSLQIRMPDTKWLDLSETNARRILVEQSRFQEALIVAEAYGLNQ
PSEWVLVLWEQMLKPELTEQFVAEFVAVLPLQPSMLIELGRFYRSEVQARGDQSQFSVWL
TGGGLPADWAKQLGRSFRCLLKRTRDIRLKLQLATTATGFDDVVKVCSRELDKVPENAGP
LILRKGHGGAYQPLM
NT seq
9588 nt
NT seq
+upstream
nt +downstream
nt
atggattccaatagccatccctttgaggaggatggccttccggtgctgcagttgcggaaa
tgggatccttctgaatttccgtacagtccttctgatttcagagaaggttttatttctcca
actcggatgtcattgttgctgctttcttatgattcagagggattattgtttcccttagtt
agagggaaatcgttgattaataatgatcctgaagttagccatgaagaaacagtttctgat
acaccgaaacataaagtttctagttcatctgaatttgtagagttggatagccgtgttgac
aatgtatcgggagctagttcctcaggatccgctgatgcattcatgtctgatgtagaatcg
gtggcatggggtctatgtgtagacacatgcgatcagcatgaagaaacttcatttcgagag
ctactttttgtttctggaaaacacggggtgattgtacatgctttttctcactttaatgaa
tcttgtaaagcaatcaaaccagcacatgcgaatcgtgttgggcccggattgtgggtggag
tggggtccatcgatggagttacctcctaatttggacctcgagggagagtcaaaatgtcat
ctcgaggcttctggggaattttcaggttctcatgcagactttatggatggtgatcaatca
gtgagttcaaaggcatggttgcgcaccttttacactagagttgatagactaacatccggt
aatgatgtatatacaaagtttccgcagagatctttatttcccgataatgcaattatttca
tttaggatacttgaggaggacacacacttcctggaccttcttcagcgtagtaccgcatca
tgtgataaacctaatgacaatatttcagcttcagtaattaataaaccagatacacatcca
gattcccgcgtctcaacaacactggatgatagtgcttctaactctcgaggtggtgcagtg
aacagtttgtataagtgtgttaaagttttctctaataattcttaccagttagttggattt
gctctatctctgacgaccccaatggatgtaagtactggcaatggaaatgatgaaagccat
atcaaaattcttattgcagtggccagacttgttagctggggattacagtgggtgtattct
ataaatcttaaagaaaatcttgatagaggtccatttgagtgggtagacttctctttttct
cacagttttcttgtttgtcttagttcttgtggcctgatctcattatatggtgcctcaact
ggggcatatgttgcatcagtcagtgttataaataaaactggacctggccgttctccaaac
tccctggagcaatatagtgatgacattcccaataaaagaagctttaagaggttgtttgtg
tttcctcattcctcactggtgggcgtgatagatgattgtggtgtaacctatacttttcgt
atctgtgatcatgttccagaggaacatttttcatctgaacataccctttcttatcaacat
tgcctaggtattggacctctaaatgcgtgggaggttggtggtgctgaaattggttaccaa
agggtacttcataatgcacactcccagggcataagtagatcattgaggatgggtaaaact
tcttattttacagatagtttactgggaaatgaaaatcggaccagcaaaggtactgatatc
agatgtccaaggaatacttatgctttaaatattaacacctcttctggctcaacccagata
atgaatcagaagaagtttataggttctgatattcaatcttctcttttgcggaaagtattt
ctacttccatatggatacagtgaagacaatatttattgcttttctcattttggaatcact
tgtctcattaagagacagagtggtgagaagaaatggagtcaagttgtgcattacaatcta
cgattagatttcatcatgaacgatgaaatgaactgtaatttgcaaagtcgagaaacctct
tctattgaagctgtgggctgcaactttaatgggtttttatatttggtgacaaaaaaaggt
ttttcagttgttcttccttcaatttcagttccaacaaatattttccctgttgaagcaata
ggatattggctaccaaattgcacagccagatcatggtgttctgctggaaatcttatggag
atatctggaattgacaaacatttgtcaccctggaaagtagaggttttggacagagttctt
ctatatgagggtcatgaagctgcagagaagctatgttgggaaaatggtttgagccttcat
atttctcggatccggcgcctgcaattggctttaaactatcaagaatttgatgaaattgag
acttctttaggaatgcttatgggggtcaatttagaagcagaaggcatcttgaggttgatc
tttgttgcagtttatttgatgtcacatgaagttagcaatgatagtgcaatatcagctgca
tcgaggcttctggcattagctacaagttattcaactatggccatacgtaaatatggcctc
ttgcagcacaagaaagtaaatttgaggtcatgggatgtcagagataatgaaggtgcttta
cttccactggtgttaactgataaagaagatgatgaagaggggaactccagaaggcttcag
gaaatgtcacactttttggttgtggttcgtaggttgcagggacaaataaatgccaaattc
agaagaccaggccaatcattgatgggtgatgcaggattaagtgcagacattttagaggat
gaatctaagggtccagttgtttcagaagattccataatattggataagtcggggctacct
gagaccgtacctcctgcctctgaagctgactctgcgagtgaagacaacctttctttagtg
caagttgacaaacatggtgccaaaagccctgcagattttctgggctttgatggagttgcc
atggtctctaaaggaggtggttttggaaaaagatctttaaaatttgaaaatcccaaagat
atgattgaacgttgggaattggataatatggacctgaaaactgttgtaaaagatgcatta
cattctggtcgtcttccattggctgtactcagattgcatctccatcgttcaaatagtttg
ttgcctgggatagaggctcatgataccttcaatgatgttcgaattgctggaagagcgatt
gcatatgatttatttcttaagggtgagattcaacttgctctaacaacactacaaaagctt
ggggaggatgttgaaacctccctgaaacagttagtatttggcagcgttagaagatctctt
cgagttcaagttgctgaagagatgaaaaaatatgcataccttgaaccacatgaattgaag
attttggagatggtgtcgctaatagagagggtatatccttgcaatagtttcttcagtacg
ctgggcacccgaaaaatggagcataaagggggatctaatgaagataaacccaacgagata
agtctgcgcctgctgcacccactcttgaacaaccttgtcattgtttgtggtgaggtagat
ggagttgttttgggtccatggaaaactgttaatgaacattcttttgctcctgaaattgat
gacgacagcaaccatgctgcctactggactgctgctgtagcatggtcagatgcctgggat
ccaacagttattgatcgtgtgctactggatcaacctctccttatgggggttcatgtatta
tgggaatcacaacttgagtattatgtgtgccacaatgaatggttagaagtatccaagctg
ctggatgtgtttccatcttatgcactatccaatggaagccttagcgttaggttggatgat
gtaaatcaagcttcatccattgagcaaggccagaagcccactggaatgactggatataac
aattacacaagcttccttgaagagccagatgctgtgaccatcagtgttccaagtgtcaga
atattcaggtttccagcaaacagggcatgctcagactggttaagaatgcttatggaacag
cagctagcaaagaagtttatcttcttggctgattactgggatggtacagaaaatattgta
cctcttctggctcgctcaggttttatggttgaccctcatgagaatttattcctggatgga
acaactggtggcacatctgattcagtactagttattggcgatgcatcagtgaatccagaa
gcaatccaagccctacataaagttgttgtgcacttttgctcccaatataacctgctgaat
ttattggatatttatctagactttcatgccttagccatggaccaaaattctctttccttt
atcttggatgcagctggtgataatgagtgggcaaggtgcctgatgctgctgaggattaaa
ggaaaagaatacgatgcatcgttttctaatgcccgtgcagttgcttcccgtaattttact
ctaggcaaaaagttcacttatctggagactgatgacatcatacaagctgttgatgatata
gctgaaggagcaggcgaaatggcagctttagcgacattaatgttcgctcctgttcctcta
caagaatgtcttagcagtggtagtgtaaacaggaatcatagctctgctcaatgcacgttg
gagaaccttagaccagccattcaagagtttcctactttgcggaatacacttgtagcggct
tgttttggtcatgatactgtttgcagtaatttgactcttaagacaaaagtgtcggggtat
tctgatttgatggattacttgaactggcgagaaggtgtatttttctcttctgcacgagat
acttcaattctgcagatggtcccatgctggttccctaaagctgttcggagactggttcag
ctctatgtgcagggacccatcggttggcaatctttagctgactctgccactgaagaactt
tctatactgagagacatttattatgtcgtaaattcaagtggtcatgctcagattagtgcc
acatcatgggaagcttctgtacaaaagcatatagaagaggagctttatgcatcttcttta
gagggagctggggttggactggagcactacttgcatcgtggtagagcattagctgcttta
aaccatctccttgcttcaagggttcataagatgacaactgataacagccaacggtcacaa
tctggaacctcctcaactgggcaagtaaatgttcacttggatctacaaacaatccttgca
ccattaacggagagtgaagagtcacttctctcatctgttataccccttgctattgagcat
tttaatgactcggtactggtggcatcatgtgcttttcttctggaactatgtggtttgtct
gctagtgttcttcgagttgatgttgctgccttgagtaggatatcttctttctataagtct
actgataataatcacttaaggcagctatcccccaagggtgctggattctatcaaacagca
gttgaagttgatgtagcagaatcacttgcacgagcactggcagatgattatcttcatcga
tgttctgctaacatgatgcagaaagataatgggaacaataatgtctgcaatcaaccgtcg
cgagctctgcttcttgttctgcatcatttggaaagggcaagtcttccagctgtatcaaat
ggagcaacatgcggctcttggttgtcaactggaaatggggatggggctgaattaaggtct
caacaaaaagccgcaagccagtactggcaattggtcaccacattttgtcagatgcataac
attcccttgagcacaaaaaaccttgctgcattagcgagagataatgattgggttgggttt
ttgtcggatgctcagattggaaaatatcccatagaaacagttatccaagtggcatcaaag
gagttcagtgatcctcggttaaagactcacatcttaacagttttgaaaagcatgcagtct
aggaagaaagttggatctacaaacttgaatactgcagaaagtggggctgaagtgtctttg
tcacatgaaaatccttacatacctgttgaattatttggaattattgcaatgtgtgaaaag
caagaaaaacctggagaggctcttctactaaaggcaaagaatctgtgctggtcaattttg
gctatgattgcatcttgttttcctgatgtctcgctactgtcctgtttaaaagtttggctg
gagataactgctgcaagggagacatcagccatcaaagttaatgatattgcatcccaaatt
gcaagaaatgtcggagctgctgtggaggccacgaattccctttctcctggtgctagaacc
acagcattccattataataggaaaaactcaaagcgtaggcgtctttctgaatcaatacct
caggattcttcatccttggcagtttctgacatttctaaagtacctggtgtctccaccatt
actggcgttaattgtcaagaagaaatggacaaactaggtgatggtgatgctatatattcc
agtgactctgatagcatggctaatgccttgtcaagaatggttgcggtgctttgtgagcag
catctgttccttcctctgctacaagcttttgagatatttcttccttcatgctctctattg
ccttttatccgtgctcttcaggccttttcgcaaatgcgcctttcagaggcttcagcacat
cttggggccttcaccatcagtgttaaagaagagcctcttcttcacacacaatctaactgg
gagagggaagagaaaattggaaaatcttggacaagttccatggctgttaaagctgctgat
gctatgctccgtacttgcccgtctccatatgagaaaagatgtttattaaggcttctttca
gctactgactttggtgatggaggggctattgcagcacgttatgggcaactctcttggaaa
atagatatggctgagccttctttgcggagtgatgaatgccctctccttggaaatgaaaca
ctagatgatgcttcgttgttgactgagctagaaaagaatgggtattgggaacaagcacgc
agttgggccaaacagttggaggctagtggagaatcacaatggaaatctgcagccaatcat
gtaacagaaatgcaggctgaagccatggtagcagaatggaaagaattcctttgggatgtc
ccagaagagagggctgctttgtggagccactgccacacgcttttcattagatactcattt
ccaggattgctggcaggggtgttctttcttaaacatgcagaggcagttgaaaaagatatt
ccagcaagagaacttcatgagattttgctacttgcactgcagtggctgagtggaatgata
actgcatcaaacccgttttatccactgcatctactgcgcgaaattgagacgagagtttgg
ctcttggctgtcgaatctgaagctcaagcgaagggtgatggtgaagattccttaacccag
cacacccgagagcagtctggatcttccaaggattctaatttaatagatcgtactgcaact
attattactaaaattgataatcatataaatgcgatgaggttcaaatcttcagagaacaat
gatcgggggaacagtcatacacatgctagaatcactcaaactgttgatcatggcttttct
agcactgctgaagggagctctaagactaaaaggagagcaaaaggcattggatcatcgaag
aagcctctgtatgatccagcagataaatcatttgagcctcttaatgtcagagatgaatca
caattcatggatgaaaacttcaaaatagattcatcattatcgaggtgggaggaaagagtt
ggacctgctgaacttgaatgggctgttctttcattgttggattttgggcaaactgctgct
gctagacaactgcaaaataagctgtctcctggcaacacaccacctgaattcctacttgta
gatactgcgttgaagcttgcttctctctctactccaatgaacagggtttctgtatcagcc
ttggacaacgaagtgcgctcagtcattctttcatacaatatttcaattggcaacgggaca
attgatccccttgaggttttggagagtttggcaaccattctggtggaaggcagtgggaat
gggttatgccgaaggataatatctgttgttaaggctgcaaatgtacttggtctaactttt
gtggaggcatttgagaagcagccaatcgagctgttgcaattactttctctcaaagctcaa
gattctttcgaggaagccaaacttttggtgaagacacacacaatgccagctgctagtatt
gctcaaattcttgctgaatcgttcctaaagggtttattggcagcacatcgtggcgggtat
attgactcacaaaaagaggaaggacctgctcctctgctatggagattctccgacttctta
aaatgggctgagctttgtccatctgattcagaaattggccatgcattaatgagattagtt
atcacagggcaagaaataccccatgaatgtgaggttgagctgcttattctatcccatcat
ttctacaagttgtcagcctgtcttgatggggttgatgttcttgtagctcttgctgcgaca
agggtggaggcctatgtatgggagggtgatttttcatgccttgctcgcttgataacagga
gttggaaacttccatgcgctgaatttcatacttggaattcttattgagaaaggccaacta
gatcttctcctccaaaagtattcagcagctgcagatgccaacagtggtgctgctgctgag
gctgttagggggttccgaatggctgttctgacatcacttaaacaatttaatccggatgac
cttgatgcatttgccatggtctataatcactttgacatgaagcatgagactgctgctctt
ttggagttgcgtgcaaagcaatcatctcaactgtggtttctccgttatgacaaggatcac
catgaagacctcctcgactcaatgcgctattacattgaagctgccgaagttcattcttcc
attgatgctggcaacaaaactcgaaaagcatgtgctcaagcatcactggtatcgctacaa
atccgaatgcccgacaccaaatggctcgacctttctgaaactaacgcacggagaatccta
gtagagcagtcccggttccaggaggccctaatagtggctgaagcatacggtctgaaccaa
ccaagcgagtgggttctcgttctgtgggaacagatgctcaaaccggagctcaccgagcag
tttgtagctgaatttgttgctgtgctacctctccagccatcaatgctaatcgaacttggg
agattctaccggtctgaggtgcaagcccggggagaccagtcccagttctcggtgtggttg
actggaggtggtctgccggcagattgggccaagcagctcgggagatcattcagatgcttg
ctgaagaggactcgggacatccggctgaaactccagctggctacaacggccacagggttt
gatgatgtagtcaaggtgtgtagccgggaattggataaggtccctgaaaatgccggccca
cttatcctgaggaagggacacggaggggcttatcaacctctgatgtag
DBGET
integrated database retrieval system
