Andrographis paniculata: 127250912
Help
Entry
127250912 CDS
T08689
Name
(RefSeq) uncharacterized protein LOC127250912
KO
K06100
symplekin
Organism
apan
Andrographis paniculata
Pathway
apan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127250912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127250912
03019 Messenger RNA biogenesis [BR:
apan03019
]
127250912
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127250912
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
127250912
U7-dependent histone pre-mRNA processing factors
127250912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
HEAT_EZ
CBM77
HEAT_2
Motif
Other DBs
NCBI-GeneID:
127250912
NCBI-ProteinID:
XP_051130344
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MVGMMAAITREKVGSRINSIKYSGEDVASKLDHLRRLRDELWAADSVLLEEFLPSIIGLL
SDRLSPARKFVTQIVGEIGLKHLELLTEIIPALVDILKDDAPAVARQAIKCGIDIFRCFL
VKVSVQGCHSSEFSDSLKLSWACILKFKDEIYAMAFKVGSDGRRLSALKFIESVVLLYTP
DPNGLLEPPSDQISEGKFDEFNISWLRGGHPILSIRDLSAEASRSLGLLLDQLRFPSFKS
HSYLVIIVLIKILSTIARKRPAFYGRILPVLLGLDPSCSASGGVHLAGVYHSLRIAFESC
LNCTHPGAAPWSARLMNALNELEVGKTTVQPVMEMSDNNGRTKTAADSSADQIHVDEKPS
ADLRSEHTNASRKRIGVPGTSEASEDDNSAKRSRSTPENSEEPEYEIRGKQDKLSSTGPT
PSRSDTDNGPVQQLVAMFGVLVAQGEKAAASLDILISSISADLLAEVVMANICNLPPKSP
EDEEPLVNMVAHPDVTGNDTHMKQLSLLLTNILSDPSSCPEKEAGIKDPLLGASREFENT
EEQEPCLTVADDNIASDGMDKDCENAPVSVSESVSPEDIPAAMETNFAGITYPVNDIEGV
SSEIPGLGLSTQEVELLENAVDFSKGSSDLGNVDLTAPDDTNKEMMTSLNSTPIELDITP
TEIVQSLSTDRSEELSPRASLTDTTNISSSTATSSGFSLQLILPKISAPVIPLSDEHKDK
LQQVAFMRIISAYKQVTVAGGSQVRFSILTHSGMEFPSELDPWKLLTEHILSDYVNNEGH
ELTLQVLYRLYGEAEEDRDFFTSTTATSVYENFLLLVANTLRDSFPASDKSLSKLLGEVP
YLPNSIFTLLECLCCPGSSKNDDKELHGGDRVTQGLSTVWSLILLRPTIRDACLKIALKS
SVHHLEEVRMKAIRLVANKLYPLPNLSEKIEDFAKEMLLSVVINDESASRKEADGTEVER
EKDENISSDNQSGSHQLTPSESNLSSTVAEVQRCTSLYFALCTKKHSLFRKIFDAYKGAP
KVVKQAVHHQIPLLVRTIGSSHDLLDIISNPPTGTEELVTQVVRTLTDGTVPSPELVSTI
HRLYATKLKDIDILIPILPFLPKDEVLRLFPHLVNVPMDKFQIVLSRVLQGFNNSTPVLA
AAEALIAIHGIDPDRDGIPLKKVTDACNACFEQRNIFTQQVLAKVLNQLVEQIPLPMLFM
RTVLQAIGAFPSLVEFIMEILSRLVGKQIWKYPKLWVGFMKCVLLTKPQSFGILLKLPSA
QLENALNRTPALKAPLVAHASQAHIRSSLPRSTLSILGLVSESQDSSTTQTQPTQTQTEG
TGNLEKEKEVETEKSKESGATTS
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggtggggatgatggcggcgattactcgggagaaagttgggagtcgaattaactcgata
aagtacagcggtgaagacgttgcttcaaagctcgatcatttgaggcggctccgcgacgag
ctctgggccgcggattctgtgctgctcgaggagtttcttccctccattattggccttctc
tcggaccgtttgagccccgcacgcaaattcgtcactcaaattgttggcgaaattggttta
aagcacttggagttgttaactgaaatcataccagcacttgtagatattttgaaggatgat
gcgccagctgtcgctcgacaggccataaagtgtggtattgacatatttcgctgttttctg
gttaaagtttccgtccagggttgtcattcaagtgagttcagtgactccctgaaattatca
tgggcatgtattctgaagtttaaagatgaaatatacgcaatggcctttaaggtgggaagt
gatgggagaagattatctgcattgaagtttattgaatcggttgttttactttatactcct
gaccctaatggtttgttggagccaccttcggatcaaatttctgaagggaagtttgacgaa
ttcaatatctcatggcttcgtggtggacaccctatactcagcattagagatttgtcagct
gaagcaagtcgaagtttgggtttgctgcttgatcagctcagattcccatctttcaagtcg
catagttatttggtgataattgtgctaattaaaattttgtcgacaattgctaggaagaga
cctgccttttatggtcgaatacttccagttttacttggcttggatccttcatgctctgcc
agtggaggcgtacatcttgcaggggtgtatcattctttaaggattgcttttgagtcttgt
ttgaattgtacacaccctggtgctgcgccgtggagcgctcgtctgatgaatgcattgaat
gaacttgaagttggaaaaacaactgtacagcctgtaatggaaatgtctgacaacaatgga
agaacaaagacggcagctgattcatccgcagaccaaattcacgtggatgaaaaaccttct
gcagatttaaggtctgaacacactaatgctagtagaaaaagaattggagtaccaggtaca
tcagaggcttctgaagatgataactctgcaaagcgttcaagatcaacacctgaaaactca
gaggaacccgaatatgaaattagaggaaagcaggacaagctctcatcgactggacctact
ccatccagatcagacactgataatggacctgtgcagcagcttgtagcgatgtttggtgtg
ttggtggctcagggtgagaaagctgcagcttccttggacattctcatctctagcatatct
gctgatctattagctgaagtagttatggctaacatatgcaatcttcctccaaaaagccct
gaagatgaagagcctcttgtaaacatggttgctcatcctgatgtgactggaaatgatacc
cacatgaaacaattgtctttgttgctgacgaacatactttcagaccccagctcttgtccg
gagaaggaagctgggatcaaagatcctcttcttggagcatctagggagtttgagaatact
gaagaacaggaaccatgcttgactgtggctgatgataatattgcctctgatggcatggac
aaagattgtgaaaatgcaccagtctctgtcagcgagtctgtttcccctgaagacattcca
gctgctatggagactaattttgcagggatcacctatccagtaaatgatattgagggtgtg
tcaagtgaaattcctggacttggtttgtctactcaagaggttgaattgcttgaaaatgca
gttgatttttcgaagggctcatctgatttggggaatgtggatctcactgctccagatgat
accaataaagagatgatgactagtttaaatagtacaccaatagaattagatataacacct
accgaaatagttcaatcattgtctactgataggtctgaagagcttagccctagagcatca
cttacagacacaactaacattagctcttcaaccgcaacttcttctgggttttctttacag
ttgattctgccaaagatatctgcccctgtcattcccctttccgatgagcataaagataag
ttacaacaagtagcctttatgcgcataattagtgcttataaacaagttactgttgctgga
ggatctcaagtccgcttttctattcttacccattctggaatggagtttccatctgagctg
gacccgtggaagttactaacagaacatatactgtcggattatgtaaataatgaggggcac
gagttaacattacaagtactatacaggttatatggtgaggcagaagaagaccgtgacttt
ttcacgtcaacaactgctacatctgtgtatgaaaattttcttctccttgtggccaatacc
ttacgggattcctttccagcatctgataaatcattgagtaaattgcttggtgaagtcccg
tatctgccaaattctatatttacattgttagagtgcttatgctgccctggtagtagtaag
aatgatgataaggaattgcatggtggagatcgagttactcaggggctcagtactgtttgg
agcctaattttgctgagacctacaatccgagatgcttgccttaaaattgcgttgaagagt
tcagttcatcacttggaagaagtacgaatgaaggcaatacgtctggtggctaataaactc
tacccattaccaaacttatctgaaaaaatcgaagattttgcaaaggaaatgttgctttca
gttgttattaatgatgaaagtgcatcaagaaaggaggctgatggaactgaggttgaacga
gagaaggatgaaaatatttcaagtgacaatcagtcgggcagtcatcaattgaccccatct
gaaagcaacttgtcatctactgtggctgaggtgcagcggtgcacatctctatattttgca
ttatgtacaaagaaacattcgcttttccggaaaatctttgatgcttataagggtgcaccc
aaggtggtcaagcaggcagttcaccatcagatcccgttacttgttcgaactattgggtca
tcccatgatctccttgatataatatctaatccaccaactggaacagaagagcttgttact
caggttgttcgtacactaacagatggaacagttccttctccagagttagtatctaccatt
cacaggttatatgctacaaaactaaaggacatagatattctgattccaattttaccgttc
ctccccaaagatgaggttttacgactttttccacatcttgtgaatgtaccgatggataag
ttccaaattgtgctttcacgtgttctacaggggtttaataattccacacctgtgcttgcc
gcagctgaagcattgattgcaatacacgggattgatcccgatagagatgggatcccgctg
aagaaggtaacggatgcctgcaatgcatgttttgagcagcgaaatatatttacacagcag
gttctggccaaggtcttgaatcaactggtcgagcaaattcctctccccatgctatttatg
cggactgtattgcaggcaataggtgcttttccttctctggtggaatttatcatggaaatt
ctatctcgtcttgttggcaagcagatatggaaatatccaaaactgtgggttggcttcatg
aaatgcgtccttcttacaaaaccacaatcattcggcatcctccttaagctaccatcggcg
cagcttgaaaatgcactgaatagaactccggctctcaaggctcctttggtagctcatgcg
agccaagctcacataagatcatcgcttccaaggtctacattatctattcttggccttgtg
tcggagtcccaagattcttctacaacacaaacacaaccgacccagactcagacagaaggg
acaggcaatttagaaaaggaaaaggaagtagagacagaaaaatcgaaggaatccggcgca
acaaccagttga
DBGET
integrated database retrieval system
