Andrographis paniculata: 127251710
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Entry
127251710 CDS
T08689
Name
(RefSeq) cleavage stimulation factor subunit 77 isoform X1
KO
K14408
cleavage stimulation factor subunit 3
Organism
apan
Andrographis paniculata
Pathway
apan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127251710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127251710
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
127251710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
TPR_YpiA_C
TPR_16
TPR_15
CFAP70_mid_TPR
TPR_2
TPR_YpiA
DUF1993
Motif
Other DBs
NCBI-GeneID:
127251710
NCBI-ProteinID:
XP_051131494
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MADNIEESNDVAGSDGVADKYNVEAAELLATKALRLPLSEAVPIYEQLLTTFPTSAKYWK
QYVEAYMAANNDEATRQVFSRCLLSCLQVPLWRCYIRFIRKINDKKGVEGQEETKKAFEF
MLNYVGADISSGPVWMEYIAYLKSLPGQRTQEESNQMGIIRRTYQRAIVMPTHHVEQLWR
DYENFENTVSRALAKGLLADLQPKYNSARAVYRERKKYADEIDWNMLAVPPSGSPKEETQ
WIAWKNLLNFEKGNPQRVDNASANKRIAFSYEQCLMYLYHYPDIWYDYAMWHAKSGSRDS
AIKIFQRALKALPESDILKYAYAELEESHGAIQAAKKVYESFFGDAVKATALSQIQFIRF
LRRTEGVEAARKYFLDARKSPNCTYHVYVAYAMMAFCLDKDSKLANNIFEAGLKRFMHEP
SYILEYADFLYRLNDDRNIRALFERALSSLPSDESVEVWKKFTQFELTYGDLASMLKVEQ
RRKEALCQMGETGESTLEDSLHDLISRYSFMNLWPCSPRDLNHLAQQEWLSRNAKTKIDN
SSPAKVASSADKGVSGITNNSSVKIVYPDVSKMVVYCPIQKPGAPVPSPSGVPNTLSNGV
VMSGGGATTASSDVLKALPPSLANFAMNLPAVEGECPAPDADFVISICLQSNIPLANLKS
GAPQQLQSGSAPSTSDLSGSSKYRQTRGRQTGKRKDSDRQDDDDASTVQSQPLPRDAFKI
RQLQKARAASSRTGGSTSYGSGFSGDFSGSSS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaatatcgaagaatcaaatgacgtcgctggttctgatggggttgcggataaa
tacaacgttgaagcagccgaacttcttgcaactaaggcattgcgtttgcctttgtcggag
gctgtgccaatatacgaacaactcctgaccacatttcccacttcggcaaaatattggaag
caatatgtggaagcatacatggctgcgaacaatgatgaagcaacaagacaagtatttagt
cgctgccttttgagttgtctgcaagttccactttggcgctgctatatccgcttcataagg
aaaattaatgataaaaagggagttgagggtcaggaagagactaaaaaggcttttgaattc
atgcttaattatgtcggagctgatatatcgtctggccctgtgtggatggagtacattgcc
tatttgaaatccttaccgggtcagagaacacaagaagaatcaaatcaaatgggtattata
cgcaggacataccagagggctattgttatgcctactcatcatgtggaacagctttggagg
gattatgaaaattttgagaatacagttagccgagccctggcaaaaggattgttggctgac
ttacaaccaaaatataacagtgcaagggctgtttacagggaacgcaagaaatatgctgat
gaaatagattggaatatgcttgctgttcctccttctggttctcctaaggaggaaacacaa
tggatagcatggaaaaatttattgaactttgagaaaggcaacccgcagagagtcgataat
gcttctgcaaacaagcgaattgctttttcttatgagcagtgtctcatgtatttgtaccat
tatcctgatatatggtatgattatgctatgtggcatgcaaaaagcggttccagagactct
gcaattaaaattttccagcgtgcactgaaggctcttcctgagtcggatatcctaaagtat
gcttatgctgagctagaggaatctcatggagcaattcaggctgcaaaaaaagtgtatgaa
agtttttttggggatgctgtgaaggctacagctctttctcagatccagttcatacgattt
ttgagaagaactgaaggagttgaagcagctcgcaaatactttcttgatgctcgcaaatca
cccaattgcacataccatgtatatgttgcttatgcaatgatggccttttgtcttgataaa
gattctaagcttgcaaacaacatatttgaagcaggtctgaaacgattcatgcatgaaccc
agctacatccttgagtatgctgattttttgtaccgcttgaatgatgatagaaatatccgt
gcgctatttgaacgagcacttagctcacttccctctgatgaatcggttgaggtttggaaa
aaattcactcaatttgagctgacctatggagatcttgccagtatgttaaaggttgagcaa
aggaggaaagaagctttatgtcagatgggtgagactggagaatcaactttggaggattct
ctgcatgatcttatatcacgatatagttttatgaacctgtggccatgttcccccagggac
ttaaatcacttagctcagcaagagtggctgtctagaaatgccaagacaaagatagataat
tctagtcctgctaaagttgccagttctgcagataagggtgtatcaggaataacaaataac
tcctctgtaaagattgtttatccagatgtatccaaaatggttgtttattgccccatacaa
aagcctggtgctcctgtcccgtcaccatctggtgttccaaataccttatcaaatggtgta
gttatgagtggtggtggagcaacaactgcaagcagtgatgtattgaaagccttaccccca
tcattagcaaattttgcgatgaatttacctgctgttgaaggtgaatgcccggccccagat
gctgatttcgttatatccatatgtttgcaaagtaacatacctctggcaaatttgaaatct
ggggcacctcagcagttgcaatctgggtctgctccaagtaccagtgatctatccggttca
agcaaatatagacaaacaagaggcaggcaaaccggaaaaaggaaagattcagataggcaa
gacgatgatgatgcaagcactgtgcagagccaaccactgcccagagatgcattcaagata
cggcaattacagaaggctcgtgctgccagttcccgaactggcggctctacatcgtatggg
agtggattctcgggagacttctctggtagctctagttga
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