Andrographis paniculata: 127252058
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Entry
127252058 CDS
T08689
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52C-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
apan
Andrographis paniculata
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127252058
03041 Spliceosome [BR:
apan03041
]
127252058
03036 Chromosome and associated proteins [BR:
apan03036
]
127252058
Enzymes [BR:
apan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127252058
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127252058
mRNA cycle factors
Common to processing body (P body) and stress granule
127252058
Spliceosome [BR:
apan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
127252058
Chromosome and associated proteins [BR:
apan03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127252058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127252058
NCBI-ProteinID:
XP_051132021
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MSQRQWFNDSTSTAPARRGRPHYVPPRSRQQPNITVTVPTARTPTWRRRHVVVGGSPYRQ
MSEDFDTPRTPEELVDALSEQVREVKLESPMADSVDAAVEVTGVDIPPPVASFAEMRFFA
EALSENIRRCKYVTPTPIQRHAIPVAMAGRDLMACAQTGSGKTAAFCFPIINAIMAGKQI
GIEEHCGYSGARVMEACPMALILAPTRELACQIHEEAKKFAHQTGIKVMVAYGGTPIVYQ
LRNLEKGVDILVATPGRLIDMIERSKVSLRNVRYLALDEADRMLDMGFEPQIRKIVQEME
MPPCGERQTLLFSATFPAEIQRLASDFLSNHIFLAAGKVGSSTDLILQRVEFVSDMDKRG
HLLNLLYSQRAKVDNAKDALTLVFVETKKGADSLEGWLSRKGFPSAAIHGDKAQMERERS
LKSFRSGRTPILVATDVAARGLDIPHVAHVVNFDLPRSVDDYVHRIGRTGRAGKSGLATA
FFSEKNAPIAKALVELMQGANQEIPEWLREYADTSPRSAYGRPSHHSRNKWENQRGSYQD
YSNSDDYSSQFTDNPLATPAYTVDDYASSPFSAAQSSPHIADYNAPAATDPFNSDSYSNG
YSYGSVVPTGWD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcggcagtggttcaacgactccacctccactgcgcccgcccgccgtggccgg
ccgcattacgttccacctcgcagccgacaacagcccaacattaccgtcaccgttccaact
gctcggactccgacctggcgccgccgccacgtggtcgtcggtggatccccttatcggcag
atgtctgaggattttgatacccctcggacacctgaggagctagtcgacgccttatcggaa
caagtacgcgaagtcaaactggagtctccgatggcggacagtgtcgacgccgccgtggaa
gttacaggtgtggacatacctcctcccgtagcttcgtttgctgagatgcggttctttgcg
gaggccttgagcgagaacataaggaggtgcaagtacgtgacccccactcccatccagagg
cacgctattcccgtcgccatggccgggagagacttgatggcgtgcgctcagactggctct
ggcaaaacggcggcgttttgcttccccatcattaatgccattatggcaggtaaacagatc
gggattgaggagcattgcggttacagtggtgcgagggttatggaagcttgccctatggct
cttattttggctcctacacgagaactcgcctgtcagattcacgaggaggcgaagaaattt
gcccaccaaactgggatcaaagtaatggttgcttatggtgggacccctattgtctaccag
ttgcgcaatctggagaagggagtggacatcttggttgccactcccggtcgactcatcgac
atgatagaacgatcgaaggtttccctaaggaacgtaaggtatttagctttggacgaagct
gatcggatgttagacatgggctttgaaccccaaatcaggaagattgttcaggagatggag
atgcctccatgtggtgagaggcagacattgcttttcagtgcaacatttcctgctgaaata
cagaggcttgcctcggattttctttcaaaccacatatttcttgctgctggaaaggttggc
tccagcacggatctgatcttgcaaagagtcgagtttgtttcggacatggacaagcgaggc
catttgttgaatctcctttactcccaaagggccaaagtggacaatgctaaggatgctttg
acactagtctttgtagagaccaagaaaggagccgattcgctcgaaggttggctgtcaaga
aaaggcttcccctctgcagccattcatggtgataaagctcagatggagagagaacgctct
ctgaaatcttttagaagcggccgcacgccaattctggtggcgactgatgtggctgcacgg
ggattagatataccacacgttgctcatgtcgtaaacttcgatcttccgcgaagtgtagac
gactatgtccacaggataggacggactggccgcgctggaaaatctggcctggcgactgca
ttcttcagcgaaaagaacgcacccattgctaaggcacttgtcgaactgatgcagggagca
aatcaagaaatcccagaatggcttagggagtacgcggatacatccccgagaagtgcctat
ggcagaccatcccaccatagccgcaacaaatgggaaaaccagagaggttcataccaagat
tacagcaacagtgatgactactcgagccaattcaccgacaaccctttggcgactcctgct
tacactgtcgacgactatgcatcgtctccattttcagctgcacagagctccccccacatt
gcagactacaatgctccggcggcgacagatccgtttaattcagactcatatagcaacgga
tatagttacggttccgtcgtgccgacaggctgggactag
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