Andrographis paniculata: 127252541
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Entry
127252541 CDS
T08689
Name
(RefSeq) uncharacterized protein LOC127252541
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
apan
Andrographis paniculata
Pathway
apan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127252541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127252541
03041 Spliceosome [BR:
apan03041
]
127252541
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127252541
Spliceosome [BR:
apan03041
]
Complex B
Other components
Prp19-related factors
127252541
Complex C
127252541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
ARM_TT21_C
NRDE-2
ARM_TT21
TPR_5
PPR
Motif
Other DBs
NCBI-GeneID:
127252541
NCBI-ProteinID:
XP_051132714
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MSISQDLYPSEEDYLYEEEVLRNPNSMKLWWRYLIARSGAPFKKRAIIYERALKALPGSY
KLWHAYLRERLEIVRNFPVSHPQFQTLNNTFERALAYMHKMPRIWTMYLQSLTQQQLITK
TRRTFDRALCALPVTQHDRIWEHYLVFVSQKGVPIETSLRVYRRYLKYDPSHIEEFIEFL
INSELWQEGAERLAGVLNDDQFFSIKGKTKHRLWLELCDLLTQHASEISGLNVDAIIRGG
IRKFTDEVGRLWTSLADYYIRRGLLEKARDIFEEGMTTVITVRDFSVIFDAYSQFEESML
SIKMESLEDSEDEDDEENGVVEEEEEEEVDDRLDIEKLRKRIDKFWLKDDKDVDLRLARL
EYLMDRRPELANSVLLRQNPHNVDQWHRRVKLFEGNPTRQILTYTEAVRTVDPMKAVGKP
HTLWVAFAKLYESHKDVANARVILDKAVQVNYKAVDHLASIWCEWAEMELRHKNFKGALE
LMRRATAEPSVEVKRRVAADGNEPVQMKLHKSLRLWTFYVDLEESLGSLESTRAVYERIL
DLRIATPQIIINYAMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKS
KLERARELFEHAVEMAPAEAVKPLYLQYAKLEEDFGLAKRAMRVYSQATKAVPAQEKLGM
YEIYIARAAEIFGVPKTREIYEQAIESGLPDKDVKLMCIKYAELEKSLGEIDRSRALYKH
ASQFADPRSDPDFWNKWHEFEVQHGNEDTFREMLRVKRSVSASYSQTHFILPEYLMQKDQ
LQTLEEAKDVLKKAGVEEDEMAALEKQLLPNQDNPTSKDADRRLGFVSAGLQDGGEVKRN
KEDIELPEDSDSEDEGNVQIAQKDVPTAVFGGLTRKREEEVDKDSEAGGEPTGSESKESD
GQLGALERIKRMRRGA
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttcgcaagatctatatccgagcgaagaggattacctctacgaagaagaggtt
ctccgcaatcccaacagtatgaagctgtggtggcgatacttaattgcccgcagcggggct
ccgttcaagaaaagggcaattatttacgagcgtgcgctcaaagctttgccagggagctac
aagctgtggcacgcctatctgcgggagcgtttggagattgtaaggaattttcctgttagt
catcctcagtttcagacgctgaacaacacattcgaacgagccctcgcctatatgcataag
atgcctcggatatggacaatgtatctgcagtccttgactcagcagcagttgattactaag
acaaggcgcaccttcgacagggcattgtgcgccctgccggtcactcagcatgaccgcatc
tgggagcattacttggtattcgtgtctcagaagggtgttcctatcgagacatcgttgaga
gtgtacaggaggtatttgaagtatgacccaagtcacattgaggaatttattgagtttttg
attaattcagagttgtggcaggagggagcggagagactagcaggggtattgaatgatgat
cagttcttctccataaagggcaagacaaagcacaggttgtggttggaattgtgtgatctg
ctgacccaacacgccagtgagatttctggattgaatgtggatgctataataagaggagga
attaggaagttcacggatgaggttgggagactatggacctcactggctgactactacata
aggagaggtttgttggagaaggcaagggatatttttgaggaagggatgacaacagtgatt
acagtgagagatttcagtgttatatttgatgcatattcacagttcgaggagagtatgcta
tccattaaaatggaatcattagaggatagtgaggatgaagatgatgaggagaatggggtg
gtggaagaggaggaagaagaagaagtagatgatcggttggatattgagaagttaaggaag
agaattgacaaattctggttgaaggacgacaaggatgtggatctgaggctggcaagattg
gagtatctgatggataggagaccagaattagctaatagtgtgcttttgaggcagaatcct
cacaacgtagatcaatggcataggagagttaagctttttgaagggaatccaacaaggcaa
attttgacgtacactgaggctgtgaggactgtggaccctatgaaagctgttgggaaacca
catactttgtgggtggcatttgctaaactatacgagagccataaagatgttgcgaatgcc
cgtgtaatccttgataaagctgttcaggttaattataaggctgttgatcatctagctagt
atttggtgtgaatgggcagagatggagctcaggcacaaaaattttaaaggtgccctggaa
ctgatgcggagagccactgcagagccttcagttgaggttaaaaggagagtggctgctgat
ggcaatgaaccagtgcagatgaagcttcataaatcccttaggctctggacattttatgtt
gatttggaggaaagcctgggtagtttggagtcgactcgtgcagtttatgaaagaatactg
gacttgagaatagccaccccccaaattataataaattatgcaatgcttttggaagataac
aagtactttgaagatgcatttaaggtttatgagaggggtgtgaagatttttaaatatcct
catgtcaaagatatctgggtcacttatctttctaagtttgttaagagatatggcaaatct
aaactggaacgtgctcgagagttatttgagcatgctgttgaaatggctcctgcagaagct
gtgaaacccctttatcttcaatatgcaaaactcgaggaagactttggtcttgctaaaaga
gcaatgcgggtatacagtcaggcaaccaaggctgtccccgcccaggagaaattaggaatg
tatgaaatatacattgctcgggctgctgaaatatttggtgtacccaaaaccagagagatt
tatgaacaagctatagagtcaggtctgccagacaaagatgtgaaacttatgtgtataaag
tatgctgaacttgagaagagccttggtgaaattgatcgcagtcgggcactttataagcat
gcgtcgcagtttgctgatccaagatctgatcctgacttctggaacaagtggcatgaattt
gaggtgcaacatggaaatgaagatacttttagagagatgctccgagttaaacggagtgtt
tctgcaagttacagccagacccactttattctcccagagtatttgatgcaaaaggatcag
ttgcagacccttgaggaagctaaggatgtcctaaagaaagctggtgtggaagaggatgaa
atggctgccctcgaaaagcaattacttcctaaccaagacaatcctacatcaaaagatgct
gataggcgtttgggatttgtgagtgcgggcttgcaggatggaggagaagtcaagagaaat
aaggaggatattgagcttcccgaagacagtgactctgaagatgagggcaatgttcagata
gcacaaaaagatgttccaacagccgtgtttggaggtctgacacgaaaaagagaagaagag
gtggataaagattcagaagctggtggtgagccaactggttcagaaagcaaagagagtgat
gggcaattgggtgcattggagcgtatcaagcgaatgcgacgaggtgcataa
DBGET
integrated database retrieval system
