Andrographis paniculata: 127252545
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Entry
127252545 CDS
T08689
Name
(RefSeq) regulator of nonsense transcripts UPF3-like
KO
K14328
regulator of nonsense transcripts 3
Organism
apan
Andrographis paniculata
Pathway
apan03013
Nucleocytoplasmic transport
apan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127252545
03015 mRNA surveillance pathway
127252545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apan03019
]
127252545
Messenger RNA biogenesis [BR:
apan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127252545
mRNA cycle factors
P-body specific factors
127252545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
127252545
NCBI-ProteinID:
XP_051132719
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MKGPPDRTKVVVRHLPPTISQSNLVEHVDSRFSGRYNWLAFRPGKSSQKHLVHSRAYINF
NGAEDVIEFAEFFNGHVFVNEKGVQFKAVVEYAPLQRVPKQCSKKDGREGTILKDPEYLE
FLEFLAKPVESLPSAEIQLERKEAERAGAPKELPVVTPLMDYVRKKRAAKGGARRIMLNG
KSTRRVRQNSSKSPASGSSKRGSDKRTSTSMYVLKDSSKRGSKDKRTYLLVSKQDNQKLM
EKSADSAGLGGPLEGESGVSGSTGTGKKILLLKGKEKEIPVSVAPSQQSASSPSKTSHGS
VPYRQNQRQEAGGRIIRSILVNKGSLRNQAPSESHTELQNQDRDIKPPRTPNTHFSSKET
NGIPEDKAVNHDFPTEKQEKWIKNKDRQDYGIWTPRRLDASHSSNESLSLSASRNLQSVD
SIEDVKSAAPVNRGGDYQNAGNRRGSHYSVDNGSYRRGGRHSSAYYTNDADGSLVEGKSS
RRGVSSSYGSHEKQVWVQKSSSGS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtccgccagatcgcacgaaggttgttgtgcggcacttgccgccgacgatttcc
cagtcgaacctagtcgagcatgtcgattctcgattctccggccgctacaattggctcgcg
tttcgacctggaaaatcgagccagaagcatctagtacattctagagcttacatcaacttt
aatggagcagaggatgtaattgagtttgccgagttctttaatggtcatgtttttgtcaac
gagaaaggggttcagtttaaagccgttgtagagtatgctcctttacagcgtgttccaaag
caatgttccaagaaggatggtcgtgaaggaactatattgaaagatccagaatacttggag
tttcttgaatttcttgctaagcctgttgaaagtcttcctagtgcagaaatacaactagag
agaaaggaagctgagcgagcaggtgctccaaaggaacttcccgtagtgacgcctttaatg
gactatgttcgtaagaaaagagctgctaaaggaggagctcggcggatcatgttaaatggg
aaatcaacaagaagagttagacaaaattcatccaaaagtccagcctctggatcttcaaaa
cgaggctcggataagagaacttctaccagcatgtatgtcttaaaggacagctcaaagaga
ggtagcaaggacaaacgcacctatttattagtgtctaaacaagacaatcaaaagcttatg
gaaaaatctgctgattcagctggcttgggcggtccattggaaggagaaagtggagtctca
ggatctacaggaactggcaagaaaattctgcttctcaaaggaaaggaaaaggaaatccct
gtttctgttgctccatctcagcagagtgcatcaagtccttccaaaacttcacatggttca
gttccttacagacagaatcaacgacaagaagctggtggaagaataatcagaagcattctt
gttaacaagggtagtcttcgaaatcaagcaccatctgagtctcacactgagttgcaaaat
caggatcgggacattaagcctcctcggacacccaatacacatttttcttcgaaggaaaca
aatgggattcctgaggacaaggcagtcaaccatgattttccgactgaaaagcaagagaaa
tggataaaaaataaggacagacaagattatggtatatggacccctcggcgtttggatgca
tctcattccagtaatgaatcactatcattatctgcttcccgaaacctccagtcagtggat
tccatagaagatgtgaaatctgcggcgccagtaaatcgtggcggtgattaccagaatgca
ggaaatcggcgtggaagtcattattctgttgacaatggttcttacaggcgcgggggccga
catagttcagcttactataccaacgatgcagatggctctttagttgaggggaaatcctct
agacggggagtttcttctagttatggctcacacgagaaacaagtgtgggtccaaaagtcc
agttctggttcatag
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