Andrographis paniculata: 127253024
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Entry
127253024 CDS
T08689
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
apan
Andrographis paniculata
Pathway
apan03022
Basal transcription factors
apan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127253024
09124 Replication and repair
03420 Nucleotide excision repair
127253024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127253024
03400 DNA repair and recombination proteins [BR:
apan03400
]
127253024
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127253024
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127253024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
127253024
NCBI-ProteinID:
XP_051133387
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MTPVSSKLHTDDVSLLMVSIDTNPFFWNSMKSALPFSRFLSHVLAFLNSILLLNQLNQVV
VIATGYNSCGYIFDSSTSQIQDQRAENLLQKLEEFVEKDEAQCREDSVDGPGFSLLSGSL
SMALCYIQRVFRSGPLHPQPRILCLHGSPDGPGQYVAVMNSIFSAQRSMVPIDSCVIGAQ
HSAFLQQASYITGGVYLKPQLLDGLFQYLLTVFATDLYSRGFLQLPRPAGVDFRASCFCH
KNTIDMGYICSVCLSIFCKHQKKCTTCGSVFGEAQVQDSSTTAERKRKAP
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgtctcatctaagcttcatacagatgatgtgagtctgttaatggtgtcaatc
gacaccaacccgttcttttggaactctatgaaatccgctcttccattctcgaggtttctg
tcccatgtgctggcctttctgaattcaattcttttgctgaaccaactaaaccaagtggtt
gtaatagcaacaggttacaattcctgtggctacatatttgattcctcaacctcacagata
caagatcaacgtgccgagaatttgctgcagaaattggaggagtttgtagagaaggatgag
gctcaatgtcgggaggattcggttgatggtcctgggttctctctgctttctggctccctc
tcaatggctctgtgttatattcagagagtgtttcggtcagggccacttcacccacagcct
aggatattgtgcttacatggatctccagatggacctggacaatatgttgccgtcatgaat
tcgattttttctgctcagcgctcaatggttcctatagattcatgtgtaataggagctcag
cactctgccttcctgcagcaggcttcgtatataactgggggtgtttatctgaagcctcaa
ttgttggatggactatttcagtatcttttgacagtttttgctactgatttatattctcgt
ggctttttacaacttcctcgacctgctggagtagactttcgggcctcgtgcttttgccac
aagaacacaatcgatatgggctacatatgttctgtttgtttatccattttctgcaagcat
cagaagaaatgcactacctgtggatcggtttttggcgaggctcaagtgcaggactcgtcg
acgacagccgagcgcaagcggaaagctccataa
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