Andrographis paniculata: 127253145
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Entry
127253145 CDS
T08689
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
apan
Andrographis paniculata
Pathway
apan03022
Basal transcription factors
apan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127253145
09124 Replication and repair
03420 Nucleotide excision repair
127253145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127253145
03400 DNA repair and recombination proteins [BR:
apan03400
]
127253145
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127253145
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127253145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
SHOCT
Motif
Other DBs
NCBI-GeneID:
127253145
NCBI-ProteinID:
XP_051133531
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MADKQVVKRAKYKSSVKDPGVAGVLKMRIERFVFVPNDPTTATKLNVEFRMIKGHKFTKE
GSSKQALLNLTQDQGVNYIFEFDSFADRDACREFVATAIAHHSEAGRLINEKSDVPVSNE
QLSRAETERRIKLLQENSELQALHKQFVFGGILTDDEFWATRKKLLEHSDSRKPKQRVAL
KNEMWSVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVRQAYLKFVPNKMTEKEFWTKYSR
AEYLHSTKNIVAAAAEAAEDEELAVFLKRDDMLANEARRKIRRVDPTVDMKADEGDDYTH
LPDHGLLGDETKEVLESQYEPYRRSFAQDLNQHAAVVLQGRLVDELGDTRSVAEALARTK
QAELSDEISNRNLEKELSDKICRMAEIEDLQGPRDPAVAPLSIKDPRDYFDSQHALKALG
DTGTGAISLKSSVSSSEAYDSLRDLVSEIRGTGLSDPIMSHEVALKVLSGLTQNISSTKF
HLGNNPNESVLDRLPKVTKEELLHHWTSIQELLKHFWSSYPITTKYLYTKVTRLKDAMSQ
VYPKLQEIKESVQSDFRHHVSLLVHPMLQALDAAFAHYDADAQRRSSKSGEKPNGFA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaacaagttgttaagcgtgcaaagtacaagtcttcagtcaaggatcccggt
gtcgccggcgttctcaaaatgaggatagaaagatttgtgtttgtgccaaatgatcctaca
acagccacaaagctaaatgtggagtttaggatgataaaaggtcataagtttacaaaggag
ggttcaagtaagcaggcactacttaatcttacccaagaccagggggtaaattacattttt
gagtttgatagctttgctgatcgagatgcatgccgggaatttgttgccactgctattgca
catcattctgaagctggaaggctgatcaatgaaaagtctgatgtcccagtgagcaatgaa
caacttagtagagcagaaactgaacgaagaattaaactacttcaggagaatagtgaatta
caggcgcttcacaagcaatttgtattcggaggtatactgacagatgatgaattttgggct
acgaggaagaaattgttggagcacagcgatagccgaaagccaaagcagcgtgtggcatta
aaaaatgaaatgtggagcgtgaaaccattatctgatggtcagtccaacagagtgacgttt
aacttgacaccagaaatcattcatcagatatttgctgagaaacctgctgtacgccaggct
tatttaaagtttgtcccaaacaagatgacagaaaaagagttctggaccaagtactcaaga
gctgaatatcttcacagcacaaaaaacatagttgctgcagcagcagaagctgctgaagat
gaagagcttgctgtttttctgaagcgagatgatatgcttgcaaatgaggctaggagaaag
atcaggcgggttgatccaaccgtagacatgaaagctgatgaaggtgatgattacacacat
cttccggatcatggattacttggtgatgaaacgaaggaggtattggaatcacaatatgag
ccatatcgtagatcctttgcacaagatctgaatcagcatgctgctgttgttctacaggga
aggcttgtagatgagctaggagataccaggtctgttgcggaggcccttgcgaggactaag
caagctgagttatctgatgagatatccaataggaatttagaaaaagagctatcggacaag
atttgtagaatggctgagattgaagatctgcaagggccgcgtgatcctgcagttgctcct
ctcagcatcaaggatccacgggattattttgactctcaacatgcactaaaagcattggga
gatacaggtacaggtgcaatatcattaaaatccagcgtgagctcttccgaagcttatgat
tccttaagggatctagtctcagaaatcagaggtactggattgagtgacccaataatgagt
cacgaggttgctcttaaggtccttagtgggttgacccaaaacatctccagcacaaagttt
catctcggaaacaatccaaatgagagtgtcctggacaggttgccgaaagtcactaaagag
gagcttttacatcactggacttctatccaagaattactgaaacacttttggtcatcctac
cctattacaaccaagtacctctataccaaggtaaccagattgaaagatgcaatgtcccaa
gtttatccaaagttgcaggagatcaaggaatctgtgcagtccgatttcaggcaccatgtc
tctcttctagttcacccaatgcttcaggcactggatgctgcctttgcacactacgacgcg
gatgcacagaggagatcttccaagagtggggaaaagccaaacggcttcgcctga
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