Andrographis paniculata: 127253158
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Entry
127253158 CDS
T08689
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
apan
Andrographis paniculata
Pathway
apan03020
RNA polymerase
apan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127253158
09124 Replication and repair
03420 Nucleotide excision repair
127253158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apan03021
]
127253158
03400 DNA repair and recombination proteins [BR:
apan03400
]
127253158
Enzymes [BR:
apan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127253158
Transcription machinery [BR:
apan03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
127253158
DNA repair and recombination proteins [BR:
apan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
127253158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
127253158
NCBI-ProteinID:
XP_051133554
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MDLEEEYYEQGFNEEEEYEDDGEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTM
QEIVDESADIEIRPESQHNPGQQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAA
RLRNLTYSAPLYVDVSKQVIKKGHDGEEITETQDFTKVFIGKVPIMLRSSYCTLYNNTEK
DLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQ
NRPPSTMFVRMLSRASAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICY
NFEDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQKEMLPH
VGVGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRK
LTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLN
RLTFASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVY
ITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLR
RRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIQALQQRESPEDG
GWHELVAKGFIEYIDTEEEETTMISMTISDLVNARLNPGEAYSETYTHCEIHPSLILGVC
ASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHL
HFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKE
DFGRPDRGNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISPEDAQGQAARYTK
RDHSTSLRHSENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTY
TQEDMPWTLEGITPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDN
ISKALHKCGYQMRGFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQIL
TRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANL
KKNSFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKDIKQSKDQKKRGG
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaggaggagtactacgagcagggtttcaacgaggaggaggagtacgaagac
gacggggaagaagagataacacaggaggatgcttgggcggttatcagtgcttattttgaa
gagaaaggtttggtgcgccagcagctcgactcgttcgatgaatttatccagaacactatg
caggaaattgtcgatgaatccgccgacattgagatccgtcctgagtcgcagcataatccc
gggcagcagtcggactttgcggagactatttataagattagttttggtcagatatacctc
agtaaaccaatgatgacagaatctgatggagaaacagctactttgtttcctaaagctgcg
aggctaaggaatttgacatattcagctccgttgtatgtggatgtcagtaaacaagtaata
aagaaaggccatgacggtgaggaaattacggagactcaagattttacaaaagtctttatt
gggaaggttccaataatgctccgctcaagttattgcacactatataacaatactgagaaa
gatttaaccgaactgggagagtgcccatatgaccagggtggttatttcatcatcaatggc
agtgaaaaggttttaattgctcaggagaaaatgagcactaatcatgtttatgtatttaag
aagaggcagccaaacaaatatgcttatgtagctgaagttcggtccatggctgagacccaa
aacaggcctcctagcacaatgtttgttcggatgctttctcgagctagtgccaaggggggt
tcatctggtcaatatattcgcgccaccttaccgtacattcgcacagaaattcctattatt
attgtatttagagcactgggatttgttgctgacaaagatatattggagcacatctgctac
aatttcgaagatactcagatgatggagttgctgcggccatctttggaagaagcatttgtg
atccaaaatcaacaggtggctctggattacattgggaagagaggagctacagtgggtgtt
acacgagaaaaaaggatcaagtatgctaaagagatccttcagaaagaaatgcttcctcat
gttggtgttggagaatactgcgaaactaagaaagcttattattttggctatattatccat
cgacttcttctgtgcgcactcggccggagggcggaggatgacagggatcactatggaaat
aaaagattggatcttgctggtcctttacttggtggcctgtttcgaatgttgttcagaaag
ttgaccagagatgtcaggtcttatgttcagaagtgtgttgacaatggcaaagatgtgaat
ttacaatttgcaataaaggccaaaactattacaagtggcctaaaatactctcttgcgact
ggaaactggggccaagcaaatgcagctggtacaagagctggagtgtcacaggtgttgaat
cgtctaacttttgcttctactttgtcgcatttgagaagacttaactcaccgattggccgt
gaagggaaactggctaaaccaagacagttgcacaattctcagtggggcatgatgtgtcca
gcagaaacacccgaaggacaagcctgtggattggtgaagaacctggcattaatggtctat
attacagttgggtcagcagcgtatccaattttagaatttttggaagaatggggcactgag
aacttcgaggaaatctcccctgctgtgattcctcaagcaacaaagatctttgtgaatggt
tgttgggttggcattcatcgcaatcccgacatgttggtgtcaactctgagacgtcttagg
aggcgtgttgatgtcaatactgaagttggggtggttcgagatattcgcttgaaagaactt
cgcatatacactgattatggtcgttgcagtcgaccactatttattgtagacaaacaaaga
ctacttataaaaaagaaggatattcaagcattgcaacaaagggaatctccggaagatggc
ggctggcacgagctggttgcaaaaggattcatagaatacattgatacagaagaagaagaa
actactatgatttccatgaccataagtgatcttgtaaatgcgaggctgaatcctggcgag
gcttattcggagacttatacacactgtgagattcacccttcactgatactcggtgtttgt
gcttcaatcattccctttcctgatcacaaccagtctccacgtaacacatatcagtcagct
atgggtaaacaagcaatgggtatttatgtcaccaattaccaatttcgaatggatactctg
gcctatgttctttactatcctcaaaagcctctcgtcactacacgggctatggagcattta
cattttagacagctaccggccggcatcaatgccatcgttgctatatcctgttattccgga
tacaaccaagaagattcggtcattatgaaccagtcatcagtcgaccgaggtttcttccgc
tctctatttttccgttcctacagagacgaagagaagaagatgggaaccctcgtcaaagag
gacttcggacggcctgatagaggcaacacgatgggtatgcgccatggttcctacgataaa
ttggatgacgatggattggctcctccgggaactagagtttccggtgaggacgtgattatt
ggtaaaaccactcccatatcgcccgaggatgcccaaggacaagctgcccgttacacgaaa
cgtgatcacagcacgagcctacgccacagcgagaatggaatagtcgatcaggtcctactg
actacaaacgccgacgggttacgattcgtgaaagtgagggtgagatccgtgcggatacct
cagattggcgacaaattcagcagtcggcacgggcagaagggaaccgttggtatgacatac
acacaagaagacatgccgtggacactcgaaggcattactcccgatatcatcgtcaaccct
catgctattccttcccgtatgacgatcgggcagctcatcgagtgtgtcatggggaaagtc
gctgcgcatatgggaaaggaaggcgacgccactcccttcaccgatgtaacggtcgataac
atcagcaaagccctccacaaatgcggctaccaaatgcgaggtttcgagacgatgtacaac
ggccacaccggaaggaggcttccggccatgatattccttggccctacgtactaccagagg
ctgaagcatatggttgacgacaagatccattcccgtggcaggggccctgtccaaatcctc
acaagacagcccgccgagggacgatcccgtgacggcggtctccggtttggtgaaatggag
cgcgactgcatgatcgcgcacggcgcggcgcacttcctcaaggaacggttgttcgatcaa
agcgacgcctacagaatccacgtttgtgagcggtgtggactgatcgcgatcgctaatctg
aagaagaattcgttcgagtgccgaggctgcaagaataagacagacatagttcaggtgtac
atcccatacgcttgcaagctgctgttccaagagcttatggctatggcgattgctccaaga
atgctcaccaaggacatcaaacaatctaaagatcagaagaagagaggaggttag
DBGET
integrated database retrieval system
